RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 TUT1Q9H6E5 874 aaKnown RBP28.04■■■□□ 2.08
PRKCH-216ENST00000555542 COL6A3P12111 3177 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 CCDC196A0A1B0GTZ2 297 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 ATP2A2P16615 1042 aaKnown RBP28.03■■■□□ 2.08
PRKCH-216ENST00000555542 PSMA5P28066 241 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 ADCY7P51828 1080 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 PTK7Q13308 1070 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 GRIN2CQ14957 1233 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 PPP1R18Q6NYC8 613 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 GPRASP2Q96D09 838 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 VWCEQ96DN2 955 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 GPR20Q99678 358 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 SENP7Q9BQF6 1050 aa28.03■■■□□ 2.08
PRKCH-216ENST00000555542 hCG_1984214I3L0E3 225 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 CKBP12277 381 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 CDC27P30260 824 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 ZNF200P98182 395 aaPredicted RBP28.02■■■□□ 2.08
PRKCH-216ENST00000555542 MTMR1Q13613 665 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 UTP14CQ5TAP6 766 aaKnown RBP28.02■■■□□ 2.08
PRKCH-216ENST00000555542 ZNF713Q8N859 430 aaPredicted RBP28.02■■■□□ 2.08
PRKCH-216ENST00000555542 DHX38Q92620 1227 aaKnown RBP28.02■■■□□ 2.08
PRKCH-216ENST00000555542 NKX2-4Q9H2Z4 354 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 PKD2L1Q9P0L9 805 aa28.02■■■□□ 2.08
PRKCH-216ENST00000555542 ZNF215Q9UL58 517 aaPredicted RBP28.02■■■□□ 2.08
PRKCH-216ENST00000555542 C17orf102A2RUQ5 167 aa28.01■■■□□ 2.07
PRKCH-216ENST00000555542 RABGGTBP53611 331 aa28.01■■■□□ 2.07
PRKCH-216ENST00000555542 FUT2Q10981 343 aa28.01■■■□□ 2.07
PRKCH-216ENST00000555542 MAFAQ8NHW3 353 aaPredicted RBP28.01■■■□□ 2.07
PRKCH-216ENST00000555542 SLC28A3Q9HAS3 691 aa28.01■■■□□ 2.07
PRKCH-216ENST00000555542 RIC8AQ9NPQ8 531 aa28.01■■■□□ 2.07
PRKCH-216ENST00000555542 PARNO95453 639 aaKnown RBP28■■■□□ 2.07
PRKCH-216ENST00000555542 SMIM10L2AP0DMW4 78 aa28■■■□□ 2.07
PRKCH-216ENST00000555542 SMIM10L2BP0DMW5 78 aa28■■■□□ 2.07
PRKCH-216ENST00000555542 RPS6KB1P23443 525 aa28■■■□□ 2.07
PRKCH-216ENST00000555542 ATP6V0A1Q93050 837 aa28■■■□□ 2.07
PRKCH-216ENST00000555542 FAM217BQ9NTX9 383 aaPredicted RBP28■■■□□ 2.07
PRKCH-216ENST00000555542 SMCO2A6NFE2 343 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 STXBP3O00186 592 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 ITGB5P18084 799 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 ADD1P35611 737 aaKnown RBP27.99■■■□□ 2.07
PRKCH-216ENST00000555542 TYW1BQ6NUM6 668 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 TRIM50Q86XT4 487 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 PGBD1Q96JS3 809 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 BARHL2Q9NY43 387 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 UBIAD1Q9Y5Z9 338 aa27.99■■■□□ 2.07
PRKCH-216ENST00000555542 FOSP01100 380 aaPredicted RBP27.98■■■□□ 2.07
PRKCH-216ENST00000555542 KCNJ6P48051 423 aa27.98■■■□□ 2.07
PRKCH-216ENST00000555542 RBL2Q08999 1139 aa27.98■■■□□ 2.07
PRKCH-216ENST00000555542 SLC9A7Q96T83 725 aa27.98■■■□□ 2.07
PRKCH-216ENST00000555542 GAS2L1Q99501 681 aaPredicted RBP27.98■■■□□ 2.07
PRKCH-216ENST00000555542 GLT8D2Q9H1C3 349 aa27.98■■■□□ 2.07
PRKCH-216ENST00000555542 YBX2Q9Y2T7 364 aaKnown RBP27.98■■■□□ 2.07
PRKCH-216ENST00000555542 PCDHA11Q9Y5I1 949 aa27.98■■■□□ 2.07
PRKCH-216ENST00000555542 ATP9AO75110 1047 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 BAIAP3O94812 1187 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 GNAT1P11488 350 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 THPOP40225 353 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 AKAP17AQ02040 695 aaKnown RBP27.97■■■□□ 2.07
PRKCH-216ENST00000555542 HIC1Q14526 733 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 ZNF618Q5T7W0 954 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 PPP2R2DQ66LE6 453 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 TEX2Q8IWB9 1127 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 JADE2Q9NQC1 790 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 TELO2Q9Y4R8 837 aa27.97■■■□□ 2.07
PRKCH-216ENST00000555542 KCNA2P16389 499 aa27.96■■■□□ 2.07
PRKCH-216ENST00000555542 TCF7P36402 384 aaPredicted RBP27.96■■■□□ 2.07
PRKCH-216ENST00000555542 WNT8BQ93098 351 aa27.96■■■□□ 2.07
PRKCH-216ENST00000555542 ANO3Q9BYT9 981 aa27.96■■■□□ 2.07
PRKCH-216ENST00000555542 PRDM12Q9H4Q4 367 aa27.96■■■□□ 2.07
PRKCH-216ENST00000555542 PPP4R2Q9NY27 417 aa27.96■■■□□ 2.07
PRKCH-216ENST00000555542 MAFGO15525 162 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 SCG2P13521 617 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 MYOGP15173 224 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 AP3B2Q13367 1082 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 PFKFB3Q16875 520 aaPredicted RBP27.95■■■□□ 2.06
PRKCH-216ENST00000555542 CNKSR3Q6P9H4 555 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 SERINC5Q86VE9 423 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 RNPEPQ9H4A4 650 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 TET1Q8NFU7 2136 aa27.95■■■□□ 2.06
PRKCH-216ENST00000555542 TREHO43280 583 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 EPB41L2O43491 1005 aaKnown RBP27.94■■■□□ 2.06
PRKCH-216ENST00000555542 NBNO60934 754 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 ZNF76P36508 570 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 TRIM71Q2Q1W2 868 aaKnown RBP27.94■■■□□ 2.06
PRKCH-216ENST00000555542 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.94■■■□□ 2.06
PRKCH-216ENST00000555542 PHOSPHO2Q8TCD6 241 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 CCDC12Q8WUD4 166 aaPredicted RBP27.94■■■□□ 2.06
PRKCH-216ENST00000555542 SEPT1Q8WYJ6 367 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 MXRA8Q9BRK3 442 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 SETD4Q9NVD3 440 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 TMEM260Q9NX78 707 aa27.94■■■□□ 2.06
PRKCH-216ENST00000555542 CDH23Q9H251 3354 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 KIF28PB7ZC32 967 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 ARHGAP4P98171 946 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 RUFY3Q7L099 469 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 FBXL16Q8N461 479 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 GLG1Q92896 1179 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 SDF4Q9BRK5 362 aa27.93■■■□□ 2.06
PRKCH-216ENST00000555542 JPH1Q9HDC5 661 aaPredicted RBP27.93■■■□□ 2.06
PRKCH-216ENST00000555542 EMSYQ7Z589 1322 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms