RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 MTA3Q9BTC8 594 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 C17orf102A2RUQ5 167 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 H3BRB1 525 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 LGR5O75473 907 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 SMIM10L2AP0DMW4 78 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 SMIM10L2BP0DMW5 78 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 IKBKEQ14164 716 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 MYO7AQ13402 2215 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 TRIOO75962 3097 aa18.11■□□□□ 0.49
ARHGEF40-205ENST00000555052 PIK3CDO00329 1044 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 MEIS2O14770 477 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 FIBPO43427 364 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 KIF5BP33176 963 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 THPOP40225 353 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 IRX6P78412 446 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 NEDD9Q14511 834 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 SKIV2LQ15477 1246 aaKnown RBP18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 AAK1Q2M2I8 961 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 USP17L6PQ6QN14 398 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 CTCFLQ8NI51 663 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 ATP6V0A1Q93050 837 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 GPR20Q99678 358 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 ZBED2Q9BTP6 218 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 USP26Q9BXU7 913 aa18.1■□□□□ 0.49
ARHGEF40-205ENST00000555052 SIP14410 1827 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 LINC01553A4QN01 128 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 RSPH10B2B2RC85 870 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 NOP56O00567 594 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 SH2B2O14492 632 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 TREHO43280 583 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 PRC1O43663 620 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 RSPH10BP0C881 870 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 KCNQ1P51787 676 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 ERVK-21P61565 698 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 PCNX4Q63HM2 1172 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 XRRA1Q6P2D8 792 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 DBF4BQ8NFT6 615 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 NECAB3Q96P71 396 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 SENP7Q9BQF6 1050 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 LSG1Q9H089 658 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 RNPEPQ9H4A4 650 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 RTEL1Q9NZ71 1219 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 LMCD1Q9NZU5 365 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 COG5Q9UP83 839 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 TELO2Q9Y4R8 837 aa18.09■□□□□ 0.49
ARHGEF40-205ENST00000555052 CAND2O75155 1236 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 PLEKHG4Q58EX7 1191 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 TRIM50Q86XT4 487 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 KAT6AQ92794 2004 aa18.08■□□□□ 0.48
ARHGEF40-205ENST00000555052 C5orf42Q9H799 3197 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 MCM5P33992 734 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 GNAQP50148 359 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 ADAM17P78536 824 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 SMARCC2Q8TAQ2 1214 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 CUL5Q93034 780 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 TMEM87BQ96K49 555 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 OSBPL7Q9BZF2 842 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 SUGCTQ9HAC7 445 aa18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 SEC63Q9UGP8 760 aaKnown RBP18.07■□□□□ 0.48
ARHGEF40-205ENST00000555052 SLC27A2O14975 620 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 LIFRP42702 1097 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 FAM117BQ6P1L5 589 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 SP7Q8TDD2 431 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 SETD4Q9NVD3 440 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 INSL6Q9Y581 213 aa18.06■□□□□ 0.48
ARHGEF40-205ENST00000555052 PIEZO1Q92508 2521 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 AMHP03971 560 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 CTSHP09668 335 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 CMTR1Q8N1G2 835 aaKnown RBP18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 LMBR1Q8WVP7 490 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 HLA-CQ95604 372 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 ESYT1Q9BSJ8 1104 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 ZNF215Q9UL58 517 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 COL4A6Q14031 1691 aa18.05■□□□□ 0.48
ARHGEF40-205ENST00000555052 CCDC69A6NI79 296 aa18.04■□□□□ 0.48
ARHGEF40-205ENST00000555052 GNAT1P11488 350 aa18.04■□□□□ 0.48
ARHGEF40-205ENST00000555052 KCNA2P16389 499 aa18.04■□□□□ 0.48
ARHGEF40-205ENST00000555052 RXRAP19793 462 aa18.04■□□□□ 0.48
ARHGEF40-205ENST00000555052 NECTIN1Q15223 517 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms