RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 MUTP22033 750 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 AMPD3Q01432 767 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 TREML2Q5T2D2 321 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 POTEGQ6S5H5 508 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
TDP1-210ENST00000554976 SYT2Q8N9I0 419 aaPredicted RBP9.96□□□□□ -0.82
TDP1-210ENST00000554976 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 CDCA5Q96FF9 252 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
TDP1-210ENST00000554976 FGFBP2Q9BYJ0 223 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 UNC45AQ9H3U1 944 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 KIAA1024Q9UPX6 916 aa9.96□□□□□ -0.82
TDP1-210ENST00000554976 RPS6P62753 249 aaKnown RBP9.95□□□□□ -0.82
TDP1-210ENST00000554976 UBXN2AP68543 259 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 PDE4DQ08499 809 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 PSMD2Q13200 908 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 GLIS3Q8NEA6 775 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 HPS3Q969F9 1004 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 TAAR1Q96RJ0 339 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 UIMC1Q96RL1 719 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 THAP9Q9H5L6 903 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 TUFT1Q9NNX1 390 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 PXMP2Q9NR77 195 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 ZNFX1Q9P2E3 1918 aaKnown RBP9.95□□□□□ -0.82
TDP1-210ENST00000554976 ASTN1O14525 1302 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 ITIH6Q6UXX5 1313 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 GLTPD2A6NH11 291 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 CNMDO75829 334 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 PLA2G4BP0C869 781 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
TDP1-210ENST00000554976 ITGB3BPQ13352 177 aaPredicted RBP9.95□□□□□ -0.82
TDP1-210ENST00000554976 KRT31Q15323 416 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 TCP11X2Q5H9J9 407 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 HAUS3Q68CZ6 603 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 EHMT1Q9H9B1 1298 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 AGO4Q9HCK5 861 aaKnown RBP9.95□□□□□ -0.82
TDP1-210ENST00000554976 JADE2Q9NQC1 790 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 TRPM7Q96QT4 1865 aa9.95□□□□□ -0.82
TDP1-210ENST00000554976 NKRFO15226 690 aaKnown RBP eCLIP9.94□□□□□ -0.82
TDP1-210ENST00000554976 TEX33O43247 280 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 ZBED4O75132 1171 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 FECHP22830 423 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 CCNE1P24864 410 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 EPHX2P34913 555 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 PPP1R2P41236 205 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 KCNJ6P48051 423 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 GSDMDP57764 484 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 ASIC1P78348 528 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 COASYQ13057 564 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 GIT2Q14161 759 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 COG2Q14746 738 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 ANKRD40Q6AI12 368 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 EPM2AIP1Q7L775 607 aaPredicted RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 TMC6Q7Z403 805 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 C17orf53Q8N3J3 647 aaPredicted RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 RBM46Q8TBY0 533 aaKnown RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 P2RX5Q93086 422 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 DCPSQ96C86 337 aaKnown RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 RIT2Q99578 217 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 WDR11Q9BZH6 1224 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 LRRC27Q9C0I9 530 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 EXOC1Q9NV70 894 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 NPHP3-ACAD11A0A0J9YXS1 232 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 ALAS1P13196 640 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 PPATQ06203 517 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 NCAPH2Q6IBW4 605 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 KLHL10Q6JEL2 608 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 GUF1Q8N442 669 aaKnown RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 PURBQ96QR8 312 aaKnown RBP9.94□□□□□ -0.82
TDP1-210ENST00000554976 ZNF236Q9UL36 1845 aa9.94□□□□□ -0.82
TDP1-210ENST00000554976 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RGS20O76081 388 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 SERPINC1P01008 464 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 HSP90AA4PQ58FG1 418 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 LRRC55Q6ZSA7 311 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
TDP1-210ENST00000554976 CCDC150Q8NCX0 1101 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 PDCD2LQ9BRP1 358 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 KCTD10Q9H3F6 313 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 TAF1DQ9H5J8 278 aaPredicted RBP9.93□□□□□ -0.82
TDP1-210ENST00000554976 KCNH7Q9NS40 1196 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 MAPK8IP1Q9UQF2 711 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 KCNJ18B7U540 433 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 OFD1O75665 1012 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 EYA4O95677 639 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 HOXD13P35453 343 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 KCNJ12Q14500 433 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 PTPN21Q16825 1174 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 UTP14CQ5TAP6 766 aaKnown RBP9.93□□□□□ -0.82
TDP1-210ENST00000554976 LRCH2Q5VUJ6 765 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 CPXCR1Q8N123 301 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 TC2NQ8N9U0 490 aa9.93□□□□□ -0.82
TDP1-210ENST00000554976 CDK5RAP3Q96JB5 506 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms