RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NLRX1Q86UT6 975 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 DAGLBQ8NCG7 672 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 MTG1Q9BT17 334 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-214ENST00000554928 EHMT1Q9H9B1 1298 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 KCNH7Q9NS40 1196 aa14.1□□□□□ -0.15
SYNE2-214ENST00000554928 MEIS1O00470 390 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 CYP3A4P08684 503 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 HOXD8P13378 290 aaPredicted RBP14.09□□□□□ -0.15
SYNE2-214ENST00000554928 GUCY1B3Q02153 619 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 FAAP100Q0VG06 881 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 NR5A1Q13285 461 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 NBPF20Q3BBV1 942 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 KCNV1Q6PIU1 500 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 ANKRD33Q7Z3H0 272 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 TRIM50Q86XT4 487 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 TEX2Q8IWB9 1127 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 FAM126BQ8IXS8 530 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 LENG9Q96B70 501 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 TMX3Q96JJ7 454 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 ZSCAN31Q96LW9 406 aaPredicted RBP14.09□□□□□ -0.15
SYNE2-214ENST00000554928 GPR20Q99678 358 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 TRPV6Q9H1D0 765 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 MLXIPQ9HAP2 919 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
SYNE2-214ENST00000554928 PRDM5Q9NQX1 630 aaPredicted RBP14.09□□□□□ -0.15
SYNE2-214ENST00000554928 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
SYNE2-214ENST00000554928 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 ST18O60284 1047 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 CABYRO75952 493 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 NEDD9Q14511 834 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 HIC1Q14526 733 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 PLA2G4DQ86XP0 818 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 BICD2Q8TD16 824 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 TBCKQ8TEA7 893 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 TNFRSF25Q93038 417 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 GJA10Q969M2 543 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 SENP7Q9BQF6 1050 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
SYNE2-214ENST00000554928 SH2B1Q9NRF2 756 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-214ENST00000554928 TRMT13Q9NUP7 481 aaKnown RBP14.08□□□□□ -0.16
SYNE2-214ENST00000554928 CEP290O15078 2479 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 DDX39AO00148 427 aaKnown RBP14.07□□□□□ -0.16
SYNE2-214ENST00000554928 B4GALT4O60513 344 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 TDP2O95551 362 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 CD4P01730 458 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 LGALS2P05162 132 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 CLTBP09497 229 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 ZNF76P36508 570 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 MAGEA10P43363 369 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-214ENST00000554928 PSEN2P49810 448 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-214ENST00000554928 DGKDQ16760 1214 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 INF2Q27J81 1249 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 PRR16Q569H4 304 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 BRDTQ58F21 947 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-214ENST00000554928 UTP14CQ5TAP6 766 aaKnown RBP14.07□□□□□ -0.16
SYNE2-214ENST00000554928 KRT40Q6A162 431 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 CTAGE1Q96RT6 745 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 TBX21Q9UL17 535 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 UMODL1Q5DID0 1318 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
SYNE2-214ENST00000554928 BTBD18B2RXH4 712 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 HAS3O00219 553 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 WNT7AO00755 349 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
SYNE2-214ENST00000554928 CCNE2O96020 404 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 F2P00734 622 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 CIITAP33076 1130 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 MFSD10Q14728 455 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 FAM47CQ5HY64 1035 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 PIK3AP1Q6ZUJ8 805 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 WASF1Q92558 559 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 TOX2Q96NM4 488 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 PCYT2Q99447 389 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 LLPHQ9BRT6 129 aaKnown RBP14.06□□□□□ -0.16
SYNE2-214ENST00000554928 PRO3102Q9H379 93 aa14.06□□□□□ -0.16
SYNE2-214ENST00000554928 COLQQ9Y215 455 aaPredicted RBP14.06□□□□□ -0.16
SYNE2-214ENST00000554928 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 DCDC2CA8MYV0 355 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 NOP56O00567 594 aaKnown RBP14.05□□□□□ -0.16
SYNE2-214ENST00000554928 KPNA6O60684 536 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 MMP1P03956 469 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 CYP2C9P11712 490 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-214ENST00000554928 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.16
SYNE2-214ENST00000554928 KIAA0753Q2KHM9 967 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 MCTP2Q6DN12 878 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-214ENST00000554928 NIPA1Q7RTP0 329 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 KRT25Q7Z3Z0 450 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 BADQ92934 168 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 CDHR1Q96JP9 859 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 GDF15Q99988 308 aa14.05□□□□□ -0.16
SYNE2-214ENST00000554928 TMEM39AQ9NV64 488 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms