RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 SMIM10L2AP0DMW4 78 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 SMIM10L2BP0DMW5 78 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 ERVK-21P61565 698 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 GNPTABQ3T906 1256 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.2■□□□□ 0.18
XRCC3-207ENST00000554774 DBF4BQ8NFT6 615 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 TUT1Q9H6E5 874 aaKnown RBP16.2■□□□□ 0.18
XRCC3-207ENST00000554774 SUGCTQ9HAC7 445 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 LMCD1Q9NZU5 365 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 RAPGEFL1Q9UHV5 662 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 DOCK5Q9H7D0 1870 aa16.2■□□□□ 0.18
XRCC3-207ENST00000554774 SIP14410 1827 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 TREHO43280 583 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 AMHP03971 560 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 MRPS9P82933 396 aaKnown RBP16.19■□□□□ 0.18
XRCC3-207ENST00000554774 NEDD9Q14511 834 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 CYFIP1Q7L576 1253 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
XRCC3-207ENST00000554774 STAM2O75886 525 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 CTSHP09668 335 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 ICAM3P32942 547 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 ANTXR2P58335 489 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 SMARCC2Q8TAQ2 1214 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 INPP4AQ96PE3 977 aaPredicted RBP16.18■□□□□ 0.18
XRCC3-207ENST00000554774 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 INSL6Q9Y581 213 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 FRMPD4Q14CM0 1322 aa16.18■□□□□ 0.18
XRCC3-207ENST00000554774 SPATA31C2B4DYI2 1134 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 SGSM2O43147 1006 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 FIBPO43427 364 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 HOXC8P31273 242 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 SEMA3FQ13275 785 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 PLEKHG4Q58EX7 1191 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
XRCC3-207ENST00000554774 METTL7BQ6UX53 244 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
XRCC3-207ENST00000554774 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
XRCC3-207ENST00000554774 SEPT8Q92599 483 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 CUL5Q93034 780 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
XRCC3-207ENST00000554774 GPR20Q99678 358 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 C17orf80Q9BSJ5 609 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 SETD4Q9NVD3 440 aa16.17■□□□□ 0.18
XRCC3-207ENST00000554774 SUPT16HQ9Y5B9 1047 aaKnown RBP16.17■□□□□ 0.18
XRCC3-207ENST00000554774 GNAT1P11488 350 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 KIF5BP33176 963 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 SP4Q02446 784 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 TRIM50Q86XT4 487 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 FBXO22Q8NEZ5 403 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 MAP4K1Q92918 833 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 MYL10Q9BUA6 226 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 C1QTNF1Q9BXJ1 281 aa16.16■□□□□ 0.18
XRCC3-207ENST00000554774 SEC63Q9UGP8 760 aaKnown RBP16.16■□□□□ 0.18
XRCC3-207ENST00000554774 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-207ENST00000554774 CAND2O75155 1236 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 UPP2O95045 317 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 HTRA4P83105 476 aaPredicted RBP16.15■□□□□ 0.18
XRCC3-207ENST00000554774 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
XRCC3-207ENST00000554774 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 NLRX1Q86UT6 975 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 KAT6AQ92794 2004 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 LY9Q9HBG7 655 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
XRCC3-207ENST00000554774 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
XRCC3-207ENST00000554774 MEIS2O14770 477 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 DDAH1O94760 285 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 XRRA1Q6P2D8 792 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 EPHX3Q9H6B9 360 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 UBE2ZQ9H832 354 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-207ENST00000554774 BRWD1Q9NSI6 2320 aa16.14■□□□□ 0.17
XRCC3-207ENST00000554774 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 PRC1O43663 620 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 PLEKHA8P1O95397 391 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-207ENST00000554774 TOP1MTQ969P6 601 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 SENP7Q9BQF6 1050 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
XRCC3-207ENST00000554774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-207ENST00000554774 SMARCA1P28370 1054 aa16.12■□□□□ 0.17
XRCC3-207ENST00000554774 GNAQP50148 359 aa16.12■□□□□ 0.17
XRCC3-207ENST00000554774 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-207ENST00000554774 EPC2Q52LR7 807 aa16.12■□□□□ 0.17
XRCC3-207ENST00000554774 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
XRCC3-207ENST00000554774 SRBD1Q8N5C6 995 aaKnown RBP16.12■□□□□ 0.17
XRCC3-207ENST00000554774 GIMAP8Q8ND71 665 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-207ENST00000554774 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
XRCC3-207ENST00000554774 APBB2Q92870 758 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms