RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZIM2Q9NZV7 527 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 FBXO2Q9UK22 296 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 OGDHLQ9ULD0 1010 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 STXBP5LQ9Y2K9 1186 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 NR2E3Q9Y5X4 410 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 GREB1LQ9C091 1923 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 MYH1P12882 1939 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CLRN2A0PK11 232 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 C3orf80F5H4A9 247 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 PDHXO00330 501 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TAF5LO75529 589 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 FMNL1O95466 1100 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 IL33O95760 270 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 UBA7P41226 1012 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 GCLCP48506 637 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 MASP1P48740 699 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SH3BGRP55822 239 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SFSWAPQ12872 951 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 FAM110CQ1W6H9 321 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 ALFQ53S48 1182 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 PLEKHG4Q58EX7 1191 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 HSP90B2PQ58FF3 399 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 CAVIN4Q5BKX8 364 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 KLHL10Q6JEL2 608 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 MRPL14Q6P1L8 145 aaKnown RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 RASSF3Q86WH2 238 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 ARL6IP6Q8N6S5 226 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 MGARPQ8TDB4 240 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 DDX12PQ92771 950 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 FRAT1Q92837 279 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-206ENST00000554429 ASB16Q96NS5 453 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 WDR18Q9BV38 432 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SELENOOQ9BVL4 669 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 SRCIN1Q9C0H9 1055 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 AGTPBP1Q9UPW5 1226 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 DAGLAQ9Y4D2 1042 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 IPPQ9Y573 584 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 PCDHGB3Q9Y5G1 929 aa3.09□□□□□ -1.91
PRPF39-206ENST00000554429 TMEM265A0A087WTH1 108 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 KLHL33A6NCF5 533 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FRAT2O75474 233 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 TCEA3O75764 348 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FARP2O94887 1054 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 KIF20AO95235 890 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 CFHP08603 1231 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FGRP09769 529 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 MYCLP1P12525 358 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 PTPRAP18433 802 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 SMARCA1P28370 1054 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 SERPINB3P29508 390 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 HOXA7P31268 230 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 HPDP32754 393 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF76P36508 570 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 HALP42357 657 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 CASP2P42575 452 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 PSMC4P43686 418 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 STT3AP46977 705 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 RCAN1P53805 252 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 EXOSC10Q01780 885 aaKnown RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FKBP5Q13451 457 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 MTX1Q13505 466 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 LAMC2Q13753 1193 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 GRIK5Q16478 980 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 CRTC2Q53ET0 693 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC158Q5M9N0 1113 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 TSHZ3Q63HK5 1081 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 IQCEQ6IPM2 695 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 CDC42EP5Q6NZY7 148 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FAM117BQ6P1L5 589 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 LVRNQ6Q4G3 990 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 LBX2Q6XYB7 198 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 ATG9AQ7Z3C6 839 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 MILR1Q7Z6M3 343 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 TRMT2AQ8IZ69 625 aaKnown RBP3.09□□□□□ -1.92
PRPF39-206ENST00000554429 DEPDC4Q8N2C3 294 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 UBR7Q8N806 425 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM11Q96F44 468 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 WRNIP1Q96S55 665 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 LZTS2Q9BRK4 669 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 AP1M1Q9BXS5 423 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 ARHGAP39Q9C0H5 1083 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 VEZTQ9HBM0 779 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 SMC4Q9NTJ3 1288 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 FBXL5Q9UKA1 691 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 GJD2Q9UKL4 321 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 DENND2AQ9ULE3 1009 aa3.09□□□□□ -1.92
PRPF39-206ENST00000554429 DOCK3Q8IZD9 2030 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 NAV1Q8NEY1 1877 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 GPR75-ASB3A0A0A6YYF3 556 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 EYA2O00167 538 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PIK3CDO00329 1044 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 BAIAP3O94812 1187 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 IFIT2P09913 472 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 IFIT1P09914 478 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SLC5A1P13866 664 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 POU3F3P20264 500 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CNGA1P29973 690 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 STIP1P31948 543 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CTHP32929 405 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 GYG1P46976 350 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms