RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MARCH10Q8NA82 808 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
PPP4R3A-202ENST00000554390 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 ATP2C2O75185 946 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 RPS8P62241 208 aaKnown RBP18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 DDB1Q16531 1140 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 ZNF444Q8N0Y2 327 aaPredicted RBP18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 CASKIN2Q8WXE0 1202 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 FGRP09769 529 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 OR52Z1P0C646 297 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 C1orf131Q8NDD1 294 aaKnown RBP18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 MAGEC3Q8TD91 643 aa18.62■□□□□ 0.57
PPP4R3A-202ENST00000554390 XIRP1Q702N8 1843 aaKnown RBP18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 M0R2N6 131 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 OPLAHO14841 1288 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 SLC37A4O43826 429 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 TMBIM4Q9HC24 238 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 PLAGL2Q9UPG8 496 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 A0A1B0GUA9 196 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 RPSAP08865 295 aaKnown RBP18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 KLHDC7AQ5VTJ3 777 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 TLDC1Q6P9B6 456 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 FBXO33Q7Z6M2 555 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 AMIGO3Q86WK7 504 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 ARFGAP2Q8N6H7 521 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 TBC1D22AQ8WUA7 517 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 ZHX3Q9H4I2 956 aa18.61■□□□□ 0.57
PPP4R3A-202ENST00000554390 A0A1W2PQJ5 194 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 GOLGA6L10A6NI86 522 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 BACH1O14867 736 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 MAGEA1P43355 309 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 TRIM6Q9C030 488 aaPredicted RBP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 TULP1O00294 542 aaPredicted RBP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 SCTRP47872 440 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 NFIXQ14938 502 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 C12orf60Q5U649 245 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 CACNA2D4Q7Z3S7 1137 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 FMNL3Q8IVF7 1028 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 NOC3LQ8WTT2 800 aaKnown RBP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 KRT12Q99456 494 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 PACSIN1Q9BY11 444 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 BARHL2Q9NY43 387 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 KCNG1Q9UIX4 513 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 RTN2O75298 545 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 TMOD1P28289 359 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 UBE2SQ16763 222 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 FIGNQ5HY92 759 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 WHAMMQ8TF30 809 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 SEC16BQ96JE7 1060 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 ATP6V0A4Q9HBG4 840 aa18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
PPP4R3A-202ENST00000554390 TRAPPC3O43617 180 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 PPP1R12BO60237 982 aaPredicted RBP18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 CLSTN1O94985 981 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 ERGIC2Q96RQ1 377 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 SLC8A1P32418 973 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 KCNB1Q14721 858 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 NAA25Q14CX7 972 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 CDC37Q16543 378 aaPredicted RBP18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 ECM1Q16610 540 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 OR2W6PQ8NHA6 318 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
PPP4R3A-202ENST00000554390 USP17L5A8MUK1 530 aa18.58■□□□□ 0.57
PPP4R3A-202ENST00000554390 HNRNPH3P31942 346 aaKnown RBP18.58■□□□□ 0.57
PPP4R3A-202ENST00000554390 GBP2P32456 591 aaPredicted RBP18.58■□□□□ 0.57
PPP4R3A-202ENST00000554390 SLC12A6Q9UHW9 1150 aa18.58■□□□□ 0.57
PPP4R3A-202ENST00000554390 GCOM1H8Y6P7 765 aaPredicted RBP18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 LCA5LO95447 670 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 MYZAPP0CAP1 466 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 TNNI2P48788 182 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 GRB10Q13322 594 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 GRM4Q14833 912 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 NONOQ15233 471 aaKnown RBP eCLIP18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 VWA3BQ502W6 1294 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 NOX5Q96PH1 765 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 CCSER1Q9C0I3 900 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 BLOC1S4Q9NUP1 217 aa18.58■□□□□ 0.56
PPP4R3A-202ENST00000554390 HSPA9P38646 679 aaKnown RBP18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 XRCC4Q13426 336 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 BYSLQ13895 437 aaKnown RBP18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 KLHL7Q8IXQ5 586 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 CACNA2D3Q8IZS8 1091 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 C3orf20Q8ND61 904 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 BCCIPQ9P287 314 aaKnown RBP eCLIP18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 SIK3Q9Y2K2 1263 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 RASA1P20936 1047 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 EHHADHQ08426 723 aa18.57■□□□□ 0.56
PPP4R3A-202ENST00000554390 IFFO1Q0D2I5 559 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms