RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 STAT6P42226 847 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 KRT76Q01546 638 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 GRM1Q13255 1194 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 TMEM119Q4V9L6 283 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 MORN1Q5T089 497 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 MAMDC4Q6UXC1 1216 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 OTOP1Q7RTM1 612 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 CEP57L1Q8IYX8 460 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
TDP1-209ENST00000554180 CNNM3Q8NE01 707 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 RDM1Q8NG50 284 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 SNX29Q8TEQ0 813 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 MMTAG2Q9BU76 263 aaKnown RBP8.6□□□□□ -1.03
TDP1-209ENST00000554180 R3HDMLQ9H3Y0 253 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 THSD7BQ9C0I4 1608 aa8.6□□□□□ -1.03
TDP1-209ENST00000554180 PP2D1A8MPX8 630 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 AOC2O75106 756 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 KCNA2P16389 499 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 PLCG1P19174 1290 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 RPA1P27694 616 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 CDC25AP30304 524 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 SFNP31947 248 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 CCT6AP40227 531 aaKnown RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 JAK3P52333 1124 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 GRB10Q13322 594 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 ITGB3BPQ13352 177 aaPredicted RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 KARSQ15046 597 aaKnown RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 EPHA7Q15375 998 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 LONRF3Q496Y0 759 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 NAALADL2Q58DX5 795 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 RRAGBQ5VZM2 374 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 NCAPH2Q6IBW4 605 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 ZNF746Q6NUN9 644 aaPredicted RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 ARMCX2Q7L311 632 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 DPP9Q86TI2 863 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 SMAP1Q8IYB5 467 aaPredicted RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 PDILTQ8N807 584 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 GJA10Q969M2 543 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 DHX58Q96C10 678 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 POLR3CQ9BUI4 534 aaPredicted RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
TDP1-209ENST00000554180 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 VTA1Q9NP79 307 aa8.59□□□□□ -1.03
TDP1-209ENST00000554180 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 LRRC37A2A6NM11 1700 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 SYCE3A1L190 88 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 WDR64B1ANS9 1081 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 COBLO75128 1261 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 RGS2P41220 211 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 VEGFBP49765 207 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 FCGRTP55899 365 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 MDM2Q00987 491 aaPredicted RBP8.58□□□□□ -1.04
TDP1-209ENST00000554180 NEDD9Q14511 834 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 POSTNQ15063 836 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 NT5DC1Q5TFE4 455 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 OLFML2BQ68BL8 750 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 MIER3Q7Z3K6 550 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 SPATA20Q8TB22 786 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 LARP4BQ92615 738 aaKnown RBP8.58□□□□□ -1.04
TDP1-209ENST00000554180 USP6NLQ92738 828 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 MAML3Q96JK9 1138 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 APBA2Q99767 749 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 HSD17B14Q9BPX1 270 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 NUDT12Q9BQG2 462 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 EIF2AK1Q9BQI3 630 aaKnown RBP8.58□□□□□ -1.04
TDP1-209ENST00000554180 LRRC27Q9C0I9 530 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
TDP1-209ENST00000554180 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 SAGE1Q9NXZ1 904 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 KIAA1468Q9P260 1216 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 TUBE1Q9UJT0 475 aa8.58□□□□□ -1.04
TDP1-209ENST00000554180 PLXNB2O15031 1838 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 EML1O00423 815 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 TNPO2O14787 897 aaKnown RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 GTPBP6O43824 516 aaPredicted RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 ATP9AO75110 1047 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 SMC2O95347 1197 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 LYPLA2O95372 231 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 CAVIN2O95810 425 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 P4HBP07237 508 aaKnown RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 SPATA31C1P0DKV0 1188 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 UBA1P22314 1058 aaKnown RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 AMPD3Q01432 767 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 TTLL4Q14679 1199 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 ZRSR1Q15695 479 aaKnown RBP8.57□□□□□ -1.04
TDP1-209ENST00000554180 CNNM4Q6P4Q7 775 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 SEPT14Q6ZU15 432 aa8.57□□□□□ -1.04
TDP1-209ENST00000554180 CATSPER3Q86XQ3 398 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms