RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SEPT9Q9UHD8 586 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 PRG3Q9Y2Y8 225 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-205ENST00000554081 SALL1Q9NSC2 1324 aa2.85□□□□□ -1.95
PRPF39-205ENST00000554081 C5orf42Q9H799 3197 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 TCRBV5S4A2TA0A5A2 114 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 TMEM150BA6NC51 233 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 GOLGA6L4A6NEF3 574 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC169A6NNP5 214 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 PES1O00541 588 aaKnown RBP2.84□□□□□ -1.95
PRPF39-205ENST00000554081 LCE2BO14633 110 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 SLC27A2O14975 620 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 TBC1D12O60347 775 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 CCNT1O60563 726 aaKnown RBP2.84□□□□□ -1.95
PRPF39-205ENST00000554081 GH1P01241 217 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 VTNP04004 478 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 WEE2P0C1S8 567 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 IDEP14735 1019 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ZSCAN20P17040 1043 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-205ENST00000554081 SMPD1P17405 629 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ADCY7P51828 1080 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 AK2P54819 239 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ANAPC15P60006 121 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 IFRD2Q12894 506 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-205ENST00000554081 PPFIA1Q13136 1202 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 DGKDQ16760 1214 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 TATDN1Q6P1N9 297 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 SLC39A5Q6ZMH5 540 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 THNSL1Q8IYQ7 743 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 FANCBQ8NB91 859 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 HASPINQ8TF76 798 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 BICD1Q96G01 975 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ESYT1Q9BSJ8 1104 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 EHMT1Q9H9B1 1298 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 CLDND1Q9NY35 253 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 CYP39A1Q9NYL5 469 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 PARP2Q9UGN5 583 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF112Q9UJU3 913 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ZNF214Q9UL59 606 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-205ENST00000554081 USP20Q9Y2K6 914 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ACACAQ13085 2346 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 ANKRD31Q8N7Z5 1873 aa2.84□□□□□ -1.95
PRPF39-205ENST00000554081 CCDC196A0A1B0GTZ2 297 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 SOWAHBA6NEL2 793 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 LRRIQ4A6NIV6 560 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ZBTB5O15062 677 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ABL1P00519 1130 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 GNRH1P01148 92 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 PTMSP20962 102 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 CCND2P30279 289 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 HOXA7P31268 230 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 CTNNB1P35222 781 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 NDUFV1P49821 464 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 GNAQP50148 359 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 CPT1AP50416 773 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ALDH5A1P51649 535 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF174Q15697 407 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 TAF12Q16514 161 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 PPP4R3AQ6IN85 833 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 RSPH3Q86UC2 560 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 RHPN2Q8IUC4 686 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 RIOX2Q8IUF8 465 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 SIAH1Q8IUQ4 282 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 REXO1Q8N1G1 1221 aaKnown RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 KRI1Q8N9T8 703 aaKnown RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 TRPV1Q8NER1 839 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 CHST13Q8NET6 341 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 IL31RAQ8NI17 732 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 TIFAQ96CG3 184 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 MAP7D2Q96T17 732 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 OSMRQ99650 979 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF577Q9BSK1 485 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF576Q9H609 170 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 JMJD4Q9H9V9 463 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 SLC38A10Q9HBR0 1119 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ALG13Q9NP73 1137 aaKnown RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 GJD2Q9UKL4 321 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF215Q9UL58 517 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 RPAP1Q9BWH6 1393 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 FASNP49327 2511 aaKnown RBP2.84□□□□□ -1.96
PRPF39-205ENST00000554081 PAPPAQ13219 1627 aa2.84□□□□□ -1.96
PRPF39-205ENST00000554081 LOC102724159A0A0B4J2E5 919 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 RSPH10B2B2RC85 870 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SOX1O00570 391 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SGSM2O43147 1006 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 TREHO43280 583 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 ZC3H11AO75152 810 aaKnown RBP eCLIP2.83□□□□□ -1.966e-6■□□□□ 11.2
PRPF39-205ENST00000554081 KIF20AO95235 890 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SNAI1O95863 264 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-205ENST00000554081 ICAM1P05362 532 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SUPT20HL2P0C7V6 817 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SPATA31D3P0C874 917 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 RSPH10BP0C881 870 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 TCF7P36402 384 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-205ENST00000554081 CLCN3P51790 818 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 COL9A3Q14050 684 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-205ENST00000554081 PWP2Q15269 919 aaKnown RBP2.83□□□□□ -1.96
PRPF39-205ENST00000554081 ASPRV1Q53RT3 343 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 XKR9Q5GH70 373 aa2.83□□□□□ -1.96
PRPF39-205ENST00000554081 SPECC1Q5M775 1068 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms