RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 TMEM199Q8N511 208 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 PRPF38AQ8NAV1 312 aaKnown RBP8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 ADAMTS19Q8TE59 1207 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 FTOQ9C0B1 505 aaKnown RBP eCLIP8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 KATNBL1Q9H079 304 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 SLC38A10Q9HBR0 1119 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 IL23AQ9NPF7 189 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 NYAP2Q9P242 653 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 HPSEQ9Y251 543 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 CLIC4Q9Y696 253 aa8.12□□□□□ -1.11
MTHFD1-205ENST00000554057 NID2Q14112 1375 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 NEDD4P46934 1319 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 IGKV6D-41A0A0C4DH26 115 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 GSG1L2A8MUP6 293 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ATP2A1O14983 1001 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ZSCAN12O43309 604 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 CD4P01730 458 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 RCAN1P53805 252 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 CCL23P55773 120 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ANTXR2P58335 489 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 FANCCQ00597 558 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 GUCY1B3Q02153 619 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 TRIM29Q14134 588 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 BMS1Q14692 1282 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 NCAPHQ15003 741 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 SBK1Q52WX2 424 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 RESP18Q5W5W9 173 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 OTOP2Q7RTS6 562 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 TMC6Q7Z403 805 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 MICALL1Q8N3F8 863 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 CHST13Q8NET6 341 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ATXN2LQ8WWM7 1075 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 PPP1R13BQ96KQ4 1090 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ASB2Q96Q27 587 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 STRBPQ96SI9 672 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 UHRF1Q96T88 793 aaPredicted RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 HIPK3Q9H422 1215 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 IFNKQ9P0W0 207 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 MSRAQ9UJ68 235 aa8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 ZNF215Q9UL58 517 aaPredicted RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 PRRC2BQ5JSZ5 2229 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-205ENST00000554057 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 USP27XA6NNY8 438 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 SH2B2O14492 632 aaPredicted RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FOXP2O15409 715 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 GPAA1O43292 621 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 MYOGP15173 224 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 LIFRP42702 1097 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 TDO2P48775 406 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FOSBP53539 338 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 RABGGTBP53611 331 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 MRPS5P82675 430 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 TNFAIP2Q03169 654 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 PTPAQ15257 358 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FSCN1Q16658 493 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ARMCX5Q6P1M9 558 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 RASGRP2Q7LDG7 609 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 TLK2Q86UE8 772 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 SGMS1Q86VZ5 419 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FBXO16Q8IX29 292 aaPredicted RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FAM133AQ8N9E0 248 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 TRIML1Q8N9V2 468 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ARID3AQ99856 593 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ALG1Q9BT22 464 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 NOC4LQ9BVI4 516 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 WNT8AQ9H1J5 351 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 MTIF3Q9H2K0 278 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 TMX1Q9H3N1 280 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 A1CFQ9NQ94 594 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 RNF146Q9NTX7 359 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 ARGLU1Q9NWB6 273 aaPredicted RBP8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 FEM1BQ9UK73 627 aa8.1□□□□□ -1.11
MTHFD1-205ENST00000554057 GRIN2DO15399 1336 aa8.09□□□□□ -1.11
MTHFD1-205ENST00000554057 SOWAHBA6NEL2 793 aa8.09□□□□□ -1.11
MTHFD1-205ENST00000554057 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms