RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RNF4P78317 190 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 NFIXQ14938 502 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 NBPF9Q3BBW0 867 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 BBS9Q3SYG4 887 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SNAP47Q5SQN1 464 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 ZPBP2Q6X784 338 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 NLGN1Q8N2Q7 840 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 ZNF655Q8N720 491 aaPredicted RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 DACT3Q96B18 629 aaPredicted RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 PLCD4Q9BRC7 762 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 TRAIPQ9BWF2 469 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 XYLT2Q9H1B5 865 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 CNTD2Q9H8S5 307 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 EPB41L4AQ9HCS5 686 aaPredicted RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SIRT5Q9NXA8 310 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 TNRC6CQ9HCJ0 1690 aaKnown RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SOS1Q07889 1333 aaPredicted RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 TIAM2Q8IVF5 1701 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SLX4Q8IY92 1834 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 SMG6Q86US8 1419 aaKnown RBP4.37□□□□□ -1.71
SLIRP-202ENST00000553981 FER1L6Q2WGJ9 1857 aa4.37□□□□□ -1.71
SLIRP-202ENST00000553981 COL4A5P29400 1685 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 GLTPD2A6NH11 291 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 ERVV-2B6SEH9 535 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 N4BP3O15049 544 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 FOXN1O15353 648 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 TLR3O15455 904 aaKnown RBP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 KCNQ3O43525 872 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 FKTNO75072 461 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 CYP19A1P11511 503 aaPredicted RBP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 RAG1P15918 1043 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 PNLIPP16233 465 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 SYN1P17600 705 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 IL13P35225 146 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 AFF3P51826 1226 aaKnown RBP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 FSTL1Q12841 308 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 PWP1Q13610 501 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 NBPF12Q5TAG4 269 aaPredicted RBP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 OLFM4Q6UX06 510 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 SND1Q7KZF4 910 aaKnown RBP eCLIP4.36□□□□□ -1.711e-12■■□□□ 11.5
SLIRP-202ENST00000553981 FBXO33Q7Z6M2 555 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 RTEL1Q9NZ71 1219 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
SLIRP-202ENST00000553981 DICER1Q9UPY3 1922 aaKnown RBP4.36□□□□□ -1.71
SLIRP-202ENST00000553981 LTBP1Q14766 1721 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 UBR2Q8IWV8 1755 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 ADAMTSL1Q8N6G6 1762 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 SSU72P8A0A1W2PR75 194 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 PRAMEF22A3QJZ6 481 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 OTOL1A6NHN0 477 aaPredicted RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 IRS4O14654 1257 aaPredicted RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 SORBS3O60504 671 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 PRAMEF1O95521 474 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 SERPINB2P05120 415 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 SYPP08247 313 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 RFC4P35249 363 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 RTP1P59025 263 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 YBX1P67809 324 aaKnown RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 KIR3DS1Q14943 382 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 DALRD3Q5D0E6 543 aaKnown RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 TBC1D9BQ66K14 1250 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 ZNF530Q6P9A1 599 aaPredicted RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 DNAJC14Q6Y2X3 702 aaPredicted RBP4.35□□□□□ -1.71
SLIRP-202ENST00000553981 TMEFF1Q8IYR6 380 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 GMIPQ9P107 970 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 MINPP1Q9UNW1 487 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 PCDHB14Q9Y5E9 798 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 SNED1Q8TER0 1413 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 MRC1P22897 1456 aa4.35□□□□□ -1.71
SLIRP-202ENST00000553981 FADS2P1A8MWK0 482 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 RNMTO43148 476 aaKnown RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 DDNO94850 711 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 SASH1O94885 1247 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 ATE1O95260 518 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 POLR2BP30876 1174 aaKnown RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 PIP4K2AP48426 406 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 CDR1P51861 262 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 ERVFRD-1P60508 538 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 MTHFSDQ2M296 383 aaKnown RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 VMACQ2NL98 169 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 CWF19L2Q2TBE0 894 aaKnown RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 OVOS1Q6IE37 1185 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 SULT6B1Q6IMI4 303 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 FBXL19Q6PCT2 694 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 CXorf38Q8TB03 319 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 FCRL2Q96LA5 508 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 LRRC3Q9BY71 257 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 PRDM14Q9GZV8 571 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 PANK3Q9H999 370 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 BRMS1Q9HCU9 246 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 KBTBD4Q9NVX7 518 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 KLHL14Q9P2G3 628 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 VTI1BQ9UEU0 232 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 NARFQ9UHQ1 456 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 PASKQ96RG2 1323 aa4.34□□□□□ -1.71
SLIRP-202ENST00000553981 PLEKHG2Q9H7P9 1386 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms