RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 SNX29Q8TEQ0 813 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 A0A087X0T9 212 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 MEIS1O00470 390 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 PALMO75781 387 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 FAM228BP0C875 321 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 CCDC88AQ3V6T2 1871 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 GJB7Q6PEY0 223 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 USP17L6PQ6QN14 398 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 DHTKD1Q96HY7 919 aaPredicted RBP13.35□□□□□ -0.27
SPTB-206ENST00000553938 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
SPTB-206ENST00000553938 KIF3CO14782 793 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 AKR1B1P15121 316 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 RDXP35241 583 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 USP8P40818 1118 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 MAGEA1P43355 309 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 CACNB3P54284 484 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 EHHADHQ08426 723 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 SPA17Q15506 151 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 CALCRLQ16602 461 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 SPTY2D1Q68D10 685 aaPredicted RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 C7orf25Q9BPX7 421 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 MYH7BA7E2Y1 1941 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 CDK5RAP2Q96SN8 1893 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 ZEB2O60315 1214 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 GNGT1P63211 74 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 GUCY2DQ02846 1103 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 PSMD2Q13200 908 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 NEDD9Q14511 834 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 POTECB2RU33 542 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 IPO7O95373 1038 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 SEC24CP53992 1094 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 GPSM2P81274 684 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 KCNA1Q09470 495 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 AP1ARQ63HQ0 302 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 HAS1Q92839 578 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPTB-206ENST00000553938 CENPHQ9H3R5 247 aa13.34□□□□□ -0.27
SPTB-206ENST00000553938 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
SPTB-206ENST00000553938 COPB2P35606 906 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 PSMC6P62333 389 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 ACTN3Q08043 901 aaPredicted RBP13.33□□□□□ -0.27
SPTB-206ENST00000553938 TBC1D5Q92609 795 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 KRT12Q99456 494 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 CAPN7Q9Y6W3 813 aa13.33□□□□□ -0.27
SPTB-206ENST00000553938 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 FOXD4Q12950 439 aaPredicted RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 ZKSCAN8Q15776 578 aaPredicted RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 ASTE1Q2TB18 679 aaPredicted RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 LSM14BQ9BX40 385 aaKnown RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 TRAF5O00463 557 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 PDHBP11177 359 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 FLT3P36888 993 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 UBAP2Q5T6F2 1119 aaKnown RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
SPTB-206ENST00000553938 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 FAM169AQ9Y6X4 670 aa13.33□□□□□ -0.28
SPTB-206ENST00000553938 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 KSR1Q8IVT5 923 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 TTC36A6NLP5 189 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 SCNN1DP51172 638 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 COASYQ13057 564 aa13.32□□□□□ -0.28
SPTB-206ENST00000553938 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms