RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GNRHR2Q96P88 292 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 GZF1Q9H116 711 aaPredicted RBP4.18□□□□□ -1.74
SRP54-204ENST00000553923 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
SRP54-204ENST00000553923 NOP56O00567 594 aaKnown RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 NARSO43776 548 aaKnown RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 KNG1P01042 644 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 HOXC12P31275 282 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 CSF2RBP32927 897 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 KCNAB2Q13303 367 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 LSAMPQ13449 338 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 PRKD1Q15139 912 aaPredicted RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 SF1Q15637 639 aaKnown RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 PPP2R5EQ16537 467 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 Q6ZSN1 163 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 Q6ZUG5 572 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 METTL16Q86W50 562 aaKnown RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 ZNF654Q8IZM8 581 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 AMER2Q8N7J2 671 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 DTX3Q8N9I9 347 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 EDAQ92838 391 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 CHFRQ96EP1 664 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 ZNF341Q9BYN7 854 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 SMOC1Q9H4F8 434 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 ASH2LQ9UBL3 628 aa4.17□□□□□ -1.74
SRP54-204ENST00000553923 COA3Q9Y2R0 106 aaPredicted RBP4.17□□□□□ -1.74
SRP54-204ENST00000553923 MEFVO15553 781 aaPredicted RBP4.16□□□□□ -1.74
SRP54-204ENST00000553923 MYO1BO43795 1136 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 PDIA4P13667 645 aaKnown RBP4.16□□□□□ -1.74
SRP54-204ENST00000553923 GJA8P48165 433 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 SMN1Q16637 294 aaKnown RBP4.16□□□□□ -1.74
SRP54-204ENST00000553923 PHF19Q5T6S3 580 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 AGBL4Q5VU57 503 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 TTLL11Q8NHH1 800 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 PHOSPHO1Q8TCT1 267 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 CLEC4DQ8WXI8 215 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 GPRASP2Q96D09 838 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 C1orf159Q96HA4 380 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 PDGFDQ9GZP0 370 aaPredicted RBP4.16□□□□□ -1.74
SRP54-204ENST00000553923 KATNBL1Q9H079 304 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 MYOTQ9UBF9 498 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 ZFR2Q9UPR6 939 aaKnown RBP4.16□□□□□ -1.74
SRP54-204ENST00000553923 NPFFR2Q9Y5X5 522 aa4.16□□□□□ -1.74
SRP54-204ENST00000553923 CHGBP05060 677 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 DPTQ07507 201 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 SMAD2Q15796 467 aaKnown RBP4.15□□□□□ -1.75
SRP54-204ENST00000553923 PRSS53Q2L4Q9 553 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 USP39Q53GS9 565 aaKnown RBP4.15□□□□□ -1.75
SRP54-204ENST00000553923 CYP4F22Q6NT55 531 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 RALYLQ86SE5 291 aaKnown RBP4.15□□□□□ -1.75
SRP54-204ENST00000553923 EXTL1Q92935 676 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 BCL11AQ9H165 835 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 IKZF4Q9H2S9 585 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 DLL4Q9NR61 685 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 KCND1Q9NSA2 647 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 PCDHA2Q9Y5H9 948 aa4.15□□□□□ -1.75
SRP54-204ENST00000553923 CPP00450 1065 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 ITGAVP06756 1048 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 SNRPB2P08579 225 aaKnown RBP4.14□□□□□ -1.75
SRP54-204ENST00000553923 NAT2P11245 290 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 LTBRP36941 435 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 ECI1P42126 302 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 NASPP49321 788 aaPredicted RBP4.14□□□□□ -1.75
SRP54-204ENST00000553923 GFRA1P56159 465 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 INHBEP58166 350 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 DGCR2P98153 550 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 NCAPHQ15003 741 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 HS1BP3Q53T59 392 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 TAX1BP1Q86VP1 789 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 ZNF227Q86WZ6 799 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 CCDC140Q96MF4 163 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 LMF1Q96S06 567 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 CEP89Q96ST8 783 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 ADOQ96SZ5 270 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 EPB41L1Q9H4G0 881 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 CLDND1Q9NY35 253 aa4.14□□□□□ -1.75
SRP54-204ENST00000553923 WDR33Q9C0J8 1336 aaKnown RBP4.14□□□□□ -1.75
SRP54-204ENST00000553923 DGKIO75912 1065 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 IL18BPO95998 194 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 ABHD18Q0P651 414 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 NRN1LQ496H8 165 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 SLC35F1Q5T1Q4 408 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 GPR155Q7Z3F1 870 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 PPIL6Q8IXY8 311 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 FUKQ8N0W3 1084 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 NEIL1Q96FI4 390 aaPredicted RBP4.13□□□□□ -1.75
SRP54-204ENST00000553923 LRRC37BQ96QE4 947 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 SLC6A20Q9NP91 592 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 PTPN22Q9Y2R2 807 aa4.13□□□□□ -1.75
SRP54-204ENST00000553923 SLC27A2O14975 620 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 ZNF202O95125 648 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 RECKO95980 971 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 CKMP06732 381 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 ZNF888P0CJ79 500 aaPredicted RBP4.12□□□□□ -1.75
SRP54-204ENST00000553923 COMTP21964 271 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 PTH1RQ03431 593 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 DUSP8Q13202 625 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
SRP54-204ENST00000553923 MAMDC4Q6UXC1 1216 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms