RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 TMEM260Q9NX78 707 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 UMODL1Q5DID0 1318 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 HAS3O00219 553 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 KCNA2P16389 499 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 SREBF1P36956 1147 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 PSEN2P49810 448 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.541e-9■□□□□ 9.6
HNRNPC-208ENST00000553753 MFSD10Q14728 455 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 PTGISQ16647 500 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 JAKMIP3Q5VZ66 844 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 MCTP2Q6DN12 878 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 CYP2W1Q8TAV3 490 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 GPR20Q99678 358 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 MXRA8Q9BRK3 442 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 SLKQ9H2G2 1235 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 KCNH7Q9NS40 1196 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 VPS54Q9P1Q0 977 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 GTF2IRD1Q9UHL9 959 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 NOD1Q9Y239 953 aa11.67□□□□□ -0.54
HNRNPC-208ENST00000553753 COL6A3P12111 3177 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 H3BRB1 525 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 DEXIO95424 95 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 AK2P54819 239 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 CCL23P55773 120 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 SCRN1Q12765 414 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 CEP55Q53EZ4 464 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 GDF6Q6KF10 455 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 BICD2Q8TD16 824 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 TUT1Q9H6E5 874 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
HNRNPC-208ENST00000553753 ADAMTS3O15072 1205 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 CDKL5O76039 1030 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 LGALS2P05162 132 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 ZNF76P36508 570 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 NEK4P51957 841 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 SP4Q02446 784 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 RNPC3Q96LT9 517 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.542e-8■■■□□ 14.8
HNRNPC-208ENST00000553753 WNT8AQ9H1J5 351 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 TELO2Q9Y4R8 837 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
HNRNPC-208ENST00000553753 MEIS1O00470 390 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 PFKFB2O60825 505 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 ACRP10323 421 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 NLRP5P59047 1200 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 TMEM240Q5SV17 173 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 CRYGNQ8WXF5 182 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 IL23AQ9NPF7 189 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 PKD2L1Q9P0L9 805 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 CYP3A4P08684 503 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 ARP10275 920 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 BFSP2Q13515 415 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 PSRC1Q6PGN9 363 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 ZNF365Q70YC5 407 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 RPUSD2Q8IZ73 545 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 SCLYQ96I15 445 aa11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 ZNF215Q9UL58 517 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-208ENST00000553753 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 NIPA1Q7RTP0 329 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 TRIM50Q86XT4 487 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 AGO4Q9HCK5 861 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 NFASCO94856 1347 aa11.63□□□□□ -0.55
HNRNPC-208ENST00000553753 GSTTP1A0A1W2PQM5 241 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 FGBP02675 491 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 ZNF200P98182 395 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 HIC1Q14526 733 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 ME3Q16798 604 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 PLA2G4DQ86XP0 818 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 TRIP12Q14669 1992 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-208ENST00000553753 IGLV3-22A0A075B6J6 115 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms