RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 CYP3A7-CYP3A51PA0A087WV96 503 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 KLRC4O43908 158 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 BCRP11274 1271 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 SKILP12757 684 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 ATP1A3P13637 1013 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 GCFC2P16383 781 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CYP3A7P24462 503 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 PPP1R2P41236 205 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 AFMP43652 599 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 RBM5P52756 815 aaKnown RBP eCLIP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CCZ1BP86790 482 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CCZ1P86791 482 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 AMPD3Q01432 767 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 FMR1Q06787 632 aaKnown RBP eCLIP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 TCP10Q12799 353 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 LRMPQ12912 555 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 TRAF1Q13077 416 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 AMHR2Q16671 573 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 ABCB5Q2M3G0 1257 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CDKAL1Q5VV42 579 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 SLFN13Q68D06 897 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 TTBK2Q6IQ55 1244 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 MOXD1Q6UVY6 613 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 RASGRP2Q7LDG7 609 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 APTXQ7Z2E3 356 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 GRAMD1CQ8IYS0 662 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 LRRC47Q8N1G4 583 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 TSC1Q92574 1164 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CUL5Q93034 780 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 COA7Q96BR5 231 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 MBOAT7Q96N66 472 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 CTAGE1Q96RT6 745 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 MMTAG2Q9BU76 263 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 TDRD3Q9H7E2 651 aaKnown RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 BIN2Q9UBW5 565 aaPredicted RBP6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 PGAP2Q9UHJ9 254 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 RWDD2AQ9UIY3 292 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 ZNRF3Q9ULT6 936 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 NFE2L3Q9Y4A8 694 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 LOXHD1Q8IVV2 1947 aa6.77□□□□□ -1.33
VIPAS39-204ENST00000553576 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 DICER1Q9UPY3 1922 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PVALEFA0A1B0GWK0 134 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 USP17L10C9JJH3 530 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 F5H6K3 240 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 H7C1D1 291 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PSMD14O00487 310 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 MPHOSPH10O00566 681 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 CCNT1O60563 726 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 SERPINC1P01008 464 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 RPN1P04843 607 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 DPEP1P16444 411 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 CDK11BP21127 795 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PBX1P40424 430 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 STAT6P42226 847 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 SLC1A4P43007 532 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 KLRC3Q07444 240 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 SEPT2Q15019 361 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 KARSQ15046 597 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 DLGAP5Q15398 846 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 LETM2Q2VYF4 491 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 HYIQ5T013 277 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 JAKMIP3Q5VZ66 844 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 ARMCX5Q6P1M9 558 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 FOXR2Q6PJQ5 311 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 CABP7Q86V35 215 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 FCHSD1Q86WN1 690 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 CRYGNQ8WXF5 182 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 DPF2Q92785 391 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 RAB34Q9BZG1 259 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 ZNF395Q9H8N7 513 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PSTPIP2Q9H939 334 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 INTS13Q9NVM9 706 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 TMOD2Q9NZR1 351 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 LIMA1Q9UHB6 759 aaKnown RBP6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 MTMR7Q9Y216 660 aa6.76□□□□□ -1.33
VIPAS39-204ENST00000553576 COL4A5P29400 1685 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 CNTNAP1P78357 1384 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 KIF2AO00139 706 aaPredicted RBP6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 TBX3O15119 743 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 NRDCO43847 1150 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 FOSP01100 380 aaPredicted RBP6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 BMP3P12645 472 aa6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 SFPQP23246 707 aaKnown RBP eCLIP6.75□□□□□ -1.33
VIPAS39-204ENST00000553576 CDC25AP30304 524 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms