RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 HYIQ5T013 277 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 CLEC10AQ8IUN9 316 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 APOBEC3FQ8IUX4 373 aaKnown RBP8.2□□□□□ -1.1
ATXN3-221ENST00000553498 SPC24Q8NBT2 197 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 CCDC112Q8NEF3 446 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 CRYGNQ8WXF5 182 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 HPS1Q92902 700 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 CDK5RAP3Q96JB5 506 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 C7orf25Q9BPX7 421 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 C1QTNF2Q9BXJ5 285 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 ANO3Q9BYT9 981 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 XPO4Q9C0E2 1151 aaKnown RBP8.2□□□□□ -1.1
ATXN3-221ENST00000553498 KIAA1683Q9H0B3 1180 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 RANBP17Q9H2T7 1088 aaKnown RBP8.2□□□□□ -1.1
ATXN3-221ENST00000553498 PRR12Q9ULL5 1215 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 BCS1LQ9Y276 419 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 MRPL11Q9Y3B7 192 aaKnown RBP8.2□□□□□ -1.1
ATXN3-221ENST00000553498 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 ABCB11O95342 1321 aa8.2□□□□□ -1.1
ATXN3-221ENST00000553498 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 A0A1W2PRG0 241 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 BICDL2A1A5D9 508 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 H7C1D1 291 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 MEIS2O14770 477 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 CCP110O43303 1012 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 RAD21O60216 631 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 MARCH6O60337 910 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 MUTP22033 750 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 LMOD1P29536 600 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TECP42680 631 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TXKP42681 527 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 AFMP43652 599 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 PAK1Q13153 545 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 PSMD2Q13200 908 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 CUL4BQ13620 913 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 RASA3Q14644 834 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 NOLC1Q14978 699 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 R3HDM1Q15032 1099 aaKnown RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 KARSQ15046 597 aaKnown RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 NAALADL2Q58DX5 795 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 SV2BQ7L1I2 683 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 LRRC8AQ8IWT6 810 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 ERMNQ8TAM6 284 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TMEM39BQ9GZU3 492 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 HSD3B7Q9H2F3 369 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TTC12Q9H892 705 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-221ENST00000553498 AS3MTQ9HBK9 375 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 KCNMB3Q9NPA1 279 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 FANCLQ9NW38 375 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TMEM260Q9NX78 707 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 IFNKQ9P0W0 207 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 PCDHA12Q9UN75 941 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 SYNRGQ9UMZ2 1314 aa8.19□□□□□ -1.1
ATXN3-221ENST00000553498 COL4A5P29400 1685 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ECM29Q5VYK3 1845 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 LRRC10BA6NIK2 292 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 PHF20L1A8MW92 1017 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GCOM1H8Y6P7 765 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 KIF2AO00139 706 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 PSMA7O14818 248 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 KIF20AO95235 890 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 TDP2O95551 362 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 POLR2MP0CAP2 368 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 PLCG1P19174 1290 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 PTGS1P23219 599 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 SFPQP23246 707 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GMPSP49915 693 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GHRHRQ02643 423 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 RRP1BQ14684 758 aaKnown RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 TMEM119Q4V9L6 283 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 CDKAL1Q5VV42 579 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 MCF2L2Q86YR7 1114 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 VSTM4Q8IW00 320 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GRAMD1CQ8IYS0 662 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ADSSL1Q8N142 457 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GPC2Q8N158 579 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 GIMAP8Q8ND71 665 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 TEPSINQ96N21 525 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ZNF341Q9BYN7 854 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 TRIM9Q9C026 710 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 CNOT7Q9UIV1 285 aaKnown RBP8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ZNF112Q9UJU3 913 aa8.18□□□□□ -1.1
ATXN3-221ENST00000553498 ZNF646O15015 1829 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-221ENST00000553498 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 SLC37A4O43826 429 aa8.17□□□□□ -1.1
ATXN3-221ENST00000553498 FGFR1OPO95684 399 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms