RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 DOCK5Q9H7D0 1870 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 MEIS1O00470 390 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 TBX3O15119 743 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 FIBPO43427 364 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 EDIL3O43854 480 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 ADCY3O60266 1144 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 NEMFO60524 1076 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 CAP1Q01518 475 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
TMEM260-204ENST00000553335 MTMR1Q13613 665 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 STK38Q15208 465 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 CALCRLQ16602 461 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 CCL14Q16627 93 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 PRR16Q569H4 304 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 SEPT14Q6ZU15 432 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 PARP9Q8IXQ6 854 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 SLFN12Q8IYM2 578 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 ABHD8Q96I13 439 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-204ENST00000553335 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-204ENST00000553335 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
TMEM260-204ENST00000553335 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 PCDHGA10Q9Y5H3 936 aa11.02□□□□□ -0.65
TMEM260-204ENST00000553335 IGLV3-22A0A075B6J6 115 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 MAP3K7O43318 606 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 YEATS4O95619 227 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 TGFB3P10600 412 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 ITGB5P18084 799 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 ICAM3P32942 547 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 ACVR2BQ13705 512 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 TTLL4Q14679 1199 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 FBXO16Q8IX29 292 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 CYP2W1Q8TAV3 490 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 SPATA32Q96LK8 384 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 ZNF577Q9BSK1 485 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 ZHX1Q9UKY1 873 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-204ENST00000553335 PTPN22Q9Y2R2 807 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 CLIC4Q9Y696 253 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 MRVI1Q9Y6F6 885 aa11.01□□□□□ -0.65
TMEM260-204ENST00000553335 CCDC85CA6NKD9 419 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 WNT7AO00755 349 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 MSH4O15457 936 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 SLC37A4O43826 429 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 PPP6R2O75170 966 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 RGS20O76081 388 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 HMGCRP04035 888 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 OR52Z1P0C646 297 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 ARP10275 920 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 CYP2C19P33261 490 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 PRPHP41219 470 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 NEDD9Q14511 834 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 SLC39A14Q15043 492 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 LINC00301Q8NCQ3 95 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 KCNG4Q8TDN1 519 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 SCFD2Q8WU76 684 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 TRIB2Q92519 343 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 LENG9Q96B70 501 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 FAM20AQ96MK3 541 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 AGO4Q9HCK5 861 aaKnown RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 TBC1D22BQ9NU19 505 aa11□□□□□ -0.65
TMEM260-204ENST00000553335 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 MORC2Q9Y6X9 1032 aaPredicted RBP11□□□□□ -0.65
TMEM260-204ENST00000553335 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
TMEM260-204ENST00000553335 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
TMEM260-204ENST00000553335 SPTLC2O15270 562 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 IGHA2P01877 340 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
TMEM260-204ENST00000553335 ELNP15502 786 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 GRK4P32298 578 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 TXKP42681 527 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 PTPAQ15257 358 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
TMEM260-204ENST00000553335 IQSEC1Q6DN90 963 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 TAPT1Q6NXT6 567 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 DTHD1Q6ZMT9 781 aa10.99□□□□□ -0.65
TMEM260-204ENST00000553335 C4orf32Q8N8J7 132 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms