RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ADD1P35611 737 aaKnown RBP14.85□□□□□ -0.03
ACTN1-207ENST00000553290 RBL2Q08999 1139 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 PTK7Q13308 1070 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 DEFB128Q7Z7B8 93 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 CTAGE1Q96RT6 745 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 GPR20Q99678 358 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 TUT1Q9H6E5 874 aaKnown RBP14.85□□□□□ -0.03
ACTN1-207ENST00000553290 BCAS3Q9H6U6 928 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 UBIAD1Q9Y5Z9 338 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 SLC4A7Q9Y6M7 1214 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 SCN5AQ14524 2016 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 NID2Q14112 1375 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 STXBP3O00186 592 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 SELPP16109 830 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 ADCY7P51828 1080 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 RAB30Q15771 203 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 TIFAQ96CG3 184 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 CDX2Q99626 313 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-207ENST00000553290 PBX4Q9BYU1 374 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 MSRAQ9UJ68 235 aa14.84□□□□□ -0.03
ACTN1-207ENST00000553290 ZBBXA8MT70 800 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 CKBP12277 381 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 ITGB5P18084 799 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 MTMR1Q13613 665 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 PFKFB3Q16875 520 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-207ENST00000553290 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 LRRC8DQ7L1W4 858 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 DHX38Q92620 1227 aaKnown RBP14.83□□□□□ -0.04
ACTN1-207ENST00000553290 FTOQ9C0B1 505 aaKnown RBP eCLIP14.83□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF576Q9H609 170 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 ZSWIM6Q9HCJ5 1215 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 JADE2Q9NQC1 790 aa14.83□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF215Q9UL58 517 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-207ENST00000553290 C17orf102A2RUQ5 167 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
ACTN1-207ENST00000553290 ATP9AO75110 1047 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-207ENST00000553290 SCG2P13521 617 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 KCNA2P16389 499 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 HOXC8P31273 242 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 PBX2P40425 430 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 EVCP57679 992 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
ACTN1-207ENST00000553290 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 SLC17A8Q8NDX2 589 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 CCDC12Q8WUD4 166 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-207ENST00000553290 MXRA8Q9BRK3 442 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 ANO3Q9BYT9 981 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 CYP46A1Q9Y6A2 500 aa14.82□□□□□ -0.04
ACTN1-207ENST00000553290 ESYT2A0FGR8 921 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 BAIAP3O94812 1187 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 SMIM10L2AP0DMW4 78 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 SMIM10L2BP0DMW5 78 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 GNAT1P11488 350 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
ACTN1-207ENST00000553290 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF200P98182 395 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-207ENST00000553290 SP4Q02446 784 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 TRIM71Q2Q1W2 868 aaKnown RBP14.81□□□□□ -0.04
ACTN1-207ENST00000553290 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
ACTN1-207ENST00000553290 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 SERINC5Q86VE9 423 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 PHOSPHO2Q8TCD6 241 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 SEPT1Q8WYJ6 367 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 ATP6V0A1Q93050 837 aa14.81□□□□□ -0.04
ACTN1-207ENST00000553290 GBF1Q92538 1859 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 TET1Q8NFU7 2136 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 PDIA3P30101 505 aaKnown RBP14.8□□□□□ -0.04
ACTN1-207ENST00000553290 TCF7P36402 384 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-207ENST00000553290 SREBF1P36956 1147 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 HIC1Q14526 733 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 GRIN2CQ14957 1233 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 NTRK3Q16288 839 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 CEP55Q53EZ4 464 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 PGBD1Q96JS3 809 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 SLC9A7Q96T83 725 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 RNF26Q9BY78 433 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-207ENST00000553290 ZMYND12Q9H0C1 365 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 RNPEPQ9H4A4 650 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 SLC28A3Q9HAS3 691 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 C6orf50Q9HD87 102 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 KCNH7Q9NS40 1196 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
ACTN1-207ENST00000553290 CXCL10P02778 98 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 FOSL2P15408 326 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 IFNAR1P17181 557 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 GNA11P29992 359 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 TOB2Q14106 344 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-207ENST00000553290 GPNMBQ14956 572 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 PKN1Q16512 942 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 CHD9Q3L8U1 2897 aa14.79□□□□□ -0.04
ACTN1-207ENST00000553290 ZNF618Q5T7W0 954 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms