RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 KIF5BP33176 963 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 GABPAQ06546 454 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 DOK7Q18PE1 504 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 FKBP15Q5T1M5 1219 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 TRIM74Q86UV6 250 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 TRIM73Q86UV7 250 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 IRF2BP1Q8IU81 584 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 STAMQ92783 540 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 MTRQ99707 1265 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 FHDC1Q9C0D6 1143 aaPredicted RBP8.11□□□□□ -1.11
BEST3-212ENST00000553096 TTYH3Q9C0H2 523 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 PCDHA6Q9UN73 950 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 PCDHA8Q9Y5H6 950 aa8.11□□□□□ -1.11
BEST3-212ENST00000553096 SRRM3A6NNA2 597 aaPredicted RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 C2orf54Q08AI8 447 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 BLIDQ8IZY5 108 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 LRRC15Q8TF66 581 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 RIN2Q8WYP3 895 aaPredicted RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 TUBGCP2Q9BSJ2 902 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 PLEKHA4Q9H4M7 779 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 GDAQ9Y2T3 454 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 SMCHD1A6NHR9 2005 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 KIF13BQ9NQT8 1826 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 GRIN2DO15399 1336 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 MMP10P09238 476 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 NPR1P16066 1061 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 HNRNPH3P31942 346 aaKnown RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 MCM7P33993 719 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 TBC1D8BQ0IIM8 1120 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 PICALMQ13492 652 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 ZNF444Q8N0Y2 327 aaPredicted RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 GIMAP8Q8ND71 665 aaPredicted RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 C1orf131Q8NDD1 294 aaKnown RBP8.1□□□□□ -1.11
BEST3-212ENST00000553096 ERGIC2Q96RQ1 377 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 COA1Q9GZY4 146 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 SH3GLB2Q9NR46 395 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 STIM2Q9P246 746 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 PCDHA4Q9UN74 947 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
BEST3-212ENST00000553096 LAD1O00515 517 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 MYBL2P10244 700 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 NT5C2P49902 561 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 LIG3P49916 1009 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 SCNN1DP51172 638 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 TTI2Q6NXR4 508 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 YTHDF3Q7Z739 585 aaKnown RBP8.09□□□□□ -1.11
BEST3-212ENST00000553096 CREG2Q8IUH2 290 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 CSGALNACT2Q8N6G5 542 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 SPATA4Q8NEY3 305 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
BEST3-212ENST00000553096 TMEM60Q9H2L4 133 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 SH2D4AQ9H788 454 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 BARHL2Q9NY43 387 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 GGA2Q9UJY4 613 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 B4DLN1 442 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
BEST3-212ENST00000553096 COBLO75128 1261 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 AKR1B1P15121 316 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 CCNE1P24864 410 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 SHROOM1Q2M3G4 852 aaPredicted RBP8.09□□□□□ -1.11
BEST3-212ENST00000553096 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 IFT20Q8IY31 132 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 RASSF8Q8NHQ8 419 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 THOC1Q96FV9 657 aaKnown RBP8.09□□□□□ -1.11
BEST3-212ENST00000553096 CCSER1Q9C0I3 900 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 COL4A5P29400 1685 aa8.09□□□□□ -1.11
BEST3-212ENST00000553096 MACROD2A1Z1Q3 448 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 KLRF2D3W0D1 207 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 NDUFAB1O14561 156 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 ZMYND10O75800 440 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 FSBPO95073 299 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 LCA5LO95447 670 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 OATP04181 439 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 PLCG2P16885 1265 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.12
BEST3-212ENST00000553096 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.12
BEST3-212ENST00000553096 PAK2Q13177 524 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 COBLL1Q53SF7 1204 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 EMC10Q5UCC4 262 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 APOBEC3HQ6NTF7 200 aaKnown RBP8.09□□□□□ -1.12
BEST3-212ENST00000553096 C8orf74Q6P047 294 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 KDM7AQ6ZMT4 941 aa8.09□□□□□ -1.12
BEST3-212ENST00000553096 DTHD1Q6ZMT9 781 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms