RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
DDX23-217ENST00000553065 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
DDX23-217ENST00000553065 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
DDX23-217ENST00000553065 LZTS2Q9BRK4 669 aa12.18□□□□□ -0.46
DDX23-217ENST00000553065 DOCK5Q9H7D0 1870 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 H3BRB1 525 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 LPXNO60711 386 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 CA3P07451 260 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 KCNA2P16389 499 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 KIF5BP33176 963 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
DDX23-217ENST00000553065 TRAF1Q13077 416 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 KRT40Q6A162 431 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 METTL7BQ6UX53 244 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 LRRC8DQ7L1W4 858 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
DDX23-217ENST00000553065 TRIM50Q86XT4 487 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 PHOSPHO2Q8TCD6 241 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX23-217ENST00000553065 TUT1Q9H6E5 874 aaKnown RBP12.17□□□□□ -0.46
DDX23-217ENST00000553065 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 CERS4Q9HA82 394 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 SETD4Q9NVD3 440 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 UBIAD1Q9Y5Z9 338 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
DDX23-217ENST00000553065 EDIL3O43854 480 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 STAM2O75886 525 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
DDX23-217ENST00000553065 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
DDX23-217ENST00000553065 GNAQP50148 359 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 CCDC85BQ15834 202 aaPredicted RBP12.16□□□□□ -0.46
DDX23-217ENST00000553065 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX23-217ENST00000553065 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 PCYT2Q99447 389 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 PCDHA6Q9UN73 950 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 NOD1Q9Y239 953 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 PCDHA8Q9Y5H6 950 aa12.16□□□□□ -0.46
DDX23-217ENST00000553065 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
DDX23-217ENST00000553065 PRRC2BQ5JSZ5 2229 aaKnown RBP12.15□□□□□ -0.46
DDX23-217ENST00000553065 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 TANC1Q9C0D5 1861 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 FIBPO43427 364 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 CALM1P0DP23 149 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 CALM2P0DP24 149 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 CALM3P0DP25 149 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 NEDD9Q14511 834 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 MARCH8Q5T0T0 291 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 DBF4BQ8NFT6 615 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 SMARCC2Q8TAQ2 1214 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 KATNAL1Q9BW62 490 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
DDX23-217ENST00000553065 MTCH2Q9Y6C9 303 aa12.15□□□□□ -0.46
DDX23-217ENST00000553065 ARP10275 920 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
DDX23-217ENST00000553065 PLEKHG4Q58EX7 1191 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
DDX23-217ENST00000553065 PPP2R2DQ66LE6 453 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 CNKSR3Q6P9H4 555 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 CRYGNQ8WXF5 182 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 ATP6V0A1Q93050 837 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 SLC9A7Q96T83 725 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
DDX23-217ENST00000553065 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.13□□□□□ -0.47
DDX23-217ENST00000553065 C17orf102A2RUQ5 167 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 STXBP3O00186 592 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 CDC45O75419 566 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 LGR5O75473 907 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 BAIAP3O94812 1187 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 CHRNA1P02708 482 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 ACTN1P12814 892 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 IGFBP4P22692 258 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 HSPA4P34932 840 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 THPOP40225 353 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 SP4Q02446 784 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 NTRK3Q16288 839 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 PKN1Q16512 942 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
DDX23-217ENST00000553065 AGXT2Q9BYV1 514 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms