RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 ARSHQ5FYA8 562 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 EIF2AK1Q9BQI3 630 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 GTPBP4Q9BZE4 634 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 UBIAD1Q9Y5Z9 338 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 DHX15O43143 795 aaKnown RBP12.11□□□□□ -0.47
PFDN5-216ENST00000552341 PBX1P40424 430 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 GSDMDP57764 484 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 CCZ1BP86790 482 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-216ENST00000552341 PTPN21Q16825 1174 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
PFDN5-216ENST00000552341 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
PFDN5-216ENST00000552341 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 KCNH7Q9NS40 1196 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 RGL1Q9NZL6 768 aa12.11□□□□□ -0.47
PFDN5-216ENST00000552341 LIMA1Q9UHB6 759 aaKnown RBP12.11□□□□□ -0.47
PFDN5-216ENST00000552341 LCTP09848 1927 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 FRMD3A2A2Y4 597 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PSMA7O14818 248 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TEX33O43247 280 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 SLITRK3O94933 977 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CCNE1P24864 410 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TBX2Q13207 712 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PGM5Q15124 567 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 C17orf53Q8N3J3 647 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 SYT2Q8N9I0 419 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CLMNQ96JQ2 1002 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 RIT2Q99578 217 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CSADQ9Y600 493 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 IRF6O14896 467 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PPP1R2P41236 205 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 IREB2P48200 963 aaKnown RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PSMD2Q13200 908 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 STIM1Q13586 685 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-216ENST00000552341 KRT31Q15323 416 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 CENPPQ6IPU0 288 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 P2RX5Q93086 422 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 PXMP2Q9NR77 195 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
PFDN5-216ENST00000552341 A0A0G2JLL6 359 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 GAS7O60861 476 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 HOXA7P31268 230 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 CYP4A11Q02928 519 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 PPATQ06203 517 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 COASYQ13057 564 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 ITGB3BPQ13352 177 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 GPR162Q16538 588 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 ANKRD40Q6AI12 368 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 PRRT2Q7Z6L0 340 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 GUF1Q8N442 669 aaKnown RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 ELP3Q9H9T3 547 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 WRAP73Q9P2S5 460 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 IDEP14735 1019 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 MUTP22033 750 aa12.09□□□□□ -0.47
PFDN5-216ENST00000552341 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.472e-11■■■■□ 23.3
PFDN5-216ENST00000552341 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
PFDN5-216ENST00000552341 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms