RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 NPLOC4Q8TAT6 608 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 MYOTQ9UBF9 498 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 EFR3BQ9Y2G0 817 aa5.98□□□□□ -1.45
USP44-207ENST00000552237 UNCXA6NJT0 531 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 MAFKO60675 156 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 COMTP21964 271 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 DPTQ07507 201 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 Q6ZUG5 572 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 GPR155Q7Z3F1 870 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 TAX1BP1Q86VP1 789 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 ZNF575Q86XF7 245 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 ZNF513Q8N8E2 541 aaPredicted RBP5.97□□□□□ -1.45
USP44-207ENST00000552237 ZNF428Q96B54 188 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 SPATA32Q96LK8 384 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 IKZF4Q9H2S9 585 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 SLC4A7Q9Y6M7 1214 aa5.97□□□□□ -1.45
USP44-207ENST00000552237 H7BY64 318 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
USP44-207ENST00000552237 ECI1P42126 302 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 SMAD2Q15796 467 aaKnown RBP5.96□□□□□ -1.46
USP44-207ENST00000552237 PHF19Q5T6S3 580 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 LDLRAD1Q5T700 205 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 AMER2Q8N7J2 671 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 DLL4Q9NR61 685 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 CLDND1Q9NY35 253 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 PCDHA2Q9Y5H9 948 aa5.96□□□□□ -1.46
USP44-207ENST00000552237 RECKO95980 971 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
USP44-207ENST00000552237 INHBCP55103 352 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
USP44-207ENST00000552237 FANCCQ00597 558 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 LSAMPQ13449 338 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 EMC4Q5J8M3 183 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 CCDC103Q8IW40 242 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 PHOSPHO1Q8TCT1 267 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 NEU4Q8WWR8 484 aaPredicted RBP5.95□□□□□ -1.46
USP44-207ENST00000552237 EDAQ92838 391 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 EXTL1Q92935 676 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 EPB41L1Q9H4G0 881 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 KIAA1522Q9P206 1035 aaPredicted RBP5.95□□□□□ -1.46
USP44-207ENST00000552237 RBPJLQ9UBG7 517 aa5.95□□□□□ -1.46
USP44-207ENST00000552237 A0A087X1B8 175 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 KRIT1O00522 736 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 NARSO43776 548 aaKnown RBP5.94□□□□□ -1.46
USP44-207ENST00000552237 TADA3O75528 432 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 KLHL18O94889 574 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 COL6A1P12109 1028 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 VAMP1P23763 118 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 SOX9P48436 509 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 RBM25P49756 843 aaKnown RBP5.94□□□□□ -1.46
USP44-207ENST00000552237 PAK2Q13177 524 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 DNAJC10Q8IXB1 793 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 CPLX3Q8WVH0 158 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 BTN2A2Q8WVV5 523 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 METTL5Q9NRN9 209 aaKnown RBP5.94□□□□□ -1.46
USP44-207ENST00000552237 TMEFF2Q9UIK5 374 aaPredicted RBP5.94□□□□□ -1.46
USP44-207ENST00000552237 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
USP44-207ENST00000552237 CHGBP05060 677 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 KCNJ6P48051 423 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 C1orf210Q8IVY1 113 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 TRIM48Q8IWZ4 208 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 PPIL6Q8IXY8 311 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 RCBTB1Q8NDN9 531 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP44-207ENST00000552237 NEIL1Q96FI4 390 aaPredicted RBP5.93□□□□□ -1.46
USP44-207ENST00000552237 LGR4Q9BXB1 951 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 SMOC1Q9H4F8 434 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 WASF3Q9UPY6 502 aa5.93□□□□□ -1.46
USP44-207ENST00000552237 SCAMP3O14828 347 aaKnown RBP5.92□□□□□ -1.46
USP44-207ENST00000552237 ACO1P21399 889 aaKnown RBP5.92□□□□□ -1.46
USP44-207ENST00000552237 HOXC12P31275 282 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 CSF2RBP32927 897 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 LTBRP36941 435 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 GLRBP48167 497 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 RAC3P60763 192 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 RACK1P63244 317 aaKnown RBP5.92□□□□□ -1.46
USP44-207ENST00000552237 DGCR2P98153 550 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 AGBL4Q5VU57 503 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 REXO1L1PQ8IX06 675 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 FUKQ8N0W3 1084 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 DTX3Q8N9I9 347 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 MRGPRX3Q96LB0 322 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 PLEKHG4BQ96PX9 1271 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 ZFP69BQ9UJL9 534 aa5.92□□□□□ -1.46
USP44-207ENST00000552237 CPP00450 1065 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 ADH4P08319 380 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 GRIN1Q05586 938 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 USP10Q14694 798 aaKnown RBP5.91□□□□□ -1.46
USP44-207ENST00000552237 NCAPHQ15003 741 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 ACBD5Q5T8D3 534 aaPredicted RBP5.91□□□□□ -1.46
USP44-207ENST00000552237 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 ZG16BQ96DA0 208 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 FAM89AQ96GI7 184 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 CRAMP1Q96RY5 1269 aa5.91□□□□□ -1.46
USP44-207ENST00000552237 ASH2LQ9UBL3 628 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms