RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 RBPJLQ9UBG7 517 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 FBXO40Q9UH90 709 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ANKRD31Q8N7Z5 1873 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 TRIM49BA6NDI0 452 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 INO80B-WBP1J3KQ70 363 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ZNF286BP0CG31 522 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 XRCC6P12956 609 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 RCAN1P53805 252 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 NAP1L1P55209 391 aaKnown RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PEX3P56589 373 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 LRMPQ12912 555 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 AP3B2Q13367 1082 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 GNASQ5JWF2 1037 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 SAPCD2Q86UD0 394 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PAGE5Q96GU1 130 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ZBED3Q96IU2 234 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 INO80BQ9C086 356 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 RNF19AQ9NV58 838 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 NFE2L3Q9Y4A8 694 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 EML1O00423 815 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 CTAGE5O15320 804 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PGK1P00558 417 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 TKFCQ3LXA3 575 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 DDX12PQ92771 950 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 TAB2Q9NYJ8 693 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 LONP1P36776 959 aaKnown RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 DNA2P51530 1060 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ATP2C1P98194 919 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 CCL14Q16627 93 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 FILIP1LQ4L180 1135 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 TMEM63BQ5T3F8 832 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PLEKHH3Q7Z736 793 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ZBTB33Q86T24 672 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 CCDC65Q8IXS2 484 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ATRNL1Q5VV63 1379 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 K7ENM7 598 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 PSMA7O14818 248 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 NRDCO43847 1150 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 TRAPPC10P48553 1259 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 ATL3Q6DD88 541 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 JPH1Q9HDC5 661 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-208ENST00000552215 CYP39A1Q9NYL5 469 aa9.09□□□□□ -0.95
CHPT1-208ENST00000552215 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 RSPH10B2B2RC85 870 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 PPP6R2O75170 966 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 RSPH10BP0C881 870 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 ITGB5P18084 799 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 PGM5Q15124 567 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 PTPAQ15257 358 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 BRDTQ58F21 947 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 AXDND1Q5T1B0 1012 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 FAM178BQ8IXR5 827 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 MXRA8Q9BRK3 442 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 SRRTQ9BXP5 876 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 RANBP17Q9H2T7 1088 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 SPC25Q9HBM1 224 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 CENPFP49454 3210 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 A0A087X0B3 334 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 MED24O75448 989 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 UBASH3AP57075 661 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 SREBF2Q12772 1141 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 CSGALNACT2Q8N6G5 542 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 CD99L2Q8TCZ2 262 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 AFG1LQ8WV93 481 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 TSG101Q99816 390 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 DACH1Q9UI36 760 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 TPM3P06753 285 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 DDIT3P35638 169 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 FLT3LGP49771 235 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 TRMT1Q9NXH9 659 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 SLC9A2Q9UBY0 812 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 PUF60Q9UHX1 559 aaKnown RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 TELO2Q9Y4R8 837 aa9.08□□□□□ -0.96
CHPT1-208ENST00000552215 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-208ENST00000552215 SLC16A4O15374 487 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 IGSF3O75054 1194 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 TPM1P09493 284 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 SNHG28P0DPA3 235 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 KCNK18Q7Z418 384 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
CHPT1-208ENST00000552215 ZNF214Q9UL59 606 aaPredicted RBP9.07□□□□□ -0.96
CHPT1-208ENST00000552215 ROBO3Q96MS0 1386 aa9.07□□□□□ -0.96
CHPT1-208ENST00000552215 MANSC4A6NHS7 340 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms