RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 TRIM47Q96LD4 638 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 TIGD1Q96MW7 591 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 HSD17B14Q9BPX1 270 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 ZNF577Q9BSK1 485 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 KATNBL1Q9H079 304 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 CSRNP2Q9H175 543 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
USP44-206ENST00000551837 FAM13BQ9NYF5 915 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 SRRDQ9UH36 339 aa8.59□□□□□ -1.03
USP44-206ENST00000551837 DDX41Q9UJV9 622 aaKnown RBP8.59□□□□□ -1.03
USP44-206ENST00000551837 GALR2O43603 387 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 MBD3O95983 291 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 KCNA2P16389 499 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 RPA1P27694 616 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 SFNP31947 248 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 FLT3LGP49771 235 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 UBXN2AP68543 259 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 NKX3-2P78367 333 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 KRT76Q01546 638 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 SEMA3FQ13275 785 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 SNW1Q13573 536 aaKnown RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 ACVR2BQ13705 512 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 ZNF746Q6NUN9 644 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 ARMCX2Q7L311 632 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 SMAP1Q8IYB5 467 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 NEK9Q8TD19 979 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 ZNF296Q8WUU4 475 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 APBA2Q99767 749 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 POLR3CQ9BUI4 534 aaPredicted RBP8.58□□□□□ -1.04
USP44-206ENST00000551837 TEKT3Q9BXF9 490 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 LRWD1Q9UFC0 647 aa8.58□□□□□ -1.04
USP44-206ENST00000551837 MYH6P13533 1939 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 IGKV6D-21A0A0A0MT36 114 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 DKC1O60832 514 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP44-206ENST00000551837 GAS7O60861 476 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
USP44-206ENST00000551837 PPFIA4O75335 1185 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 SLITRK3O94933 977 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 LYPLA2O95372 231 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 CYP2B6P20813 491 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 UBA7P41226 1012 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 JAK3P52333 1124 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 SP2Q02086 613 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 GRIN1Q05586 938 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 LAMC2Q13753 1193 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 TTLL4Q14679 1199 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 LRCH2Q5VUJ6 765 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 KRT79Q5XKE5 535 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 ERMNQ8TAM6 284 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 MRPS27Q92552 414 aaKnown RBP8.57□□□□□ -1.04
USP44-206ENST00000551837 CLIC6Q96NY7 704 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 SDF4Q9BRK5 362 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 NT5C3AQ9H0P0 336 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 CUEDC2Q9H467 287 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 TUFT1Q9NNX1 390 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 CCDC39Q9UFE4 941 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 VAV3Q9UKW4 847 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 KCNH3Q9ULD8 1083 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 GABRQQ9UN88 632 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 MRVI1Q9Y6F6 885 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
USP44-206ENST00000551837 TRAK2O60296 914 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 ZNF202O95125 648 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 LETM1O95202 739 aaPredicted RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 P4HBP07237 508 aaKnown RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 TXNP10599 105 aaKnown RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 CAPN2P17655 700 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 SYKP43405 635 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 FAM160A1Q05DH4 1040 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 DUSP28Q4G0W2 176 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 CELF3Q5SZQ8 465 aaKnown RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 MFSD14CQ5VZR4 134 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 METTL7BQ6UX53 244 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 ABHD15Q6UXT9 468 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 CCDC73Q6ZRK6 1079 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 CATSPER3Q86XQ3 398 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 C4orf19Q8IY42 314 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 IQUBQ8NA54 791 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 SEPT1Q8WYJ6 367 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 EPSTI1Q96J88 318 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 ANP32EQ9BTT0 268 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 MMTAG2Q9BU76 263 aaKnown RBP8.56□□□□□ -1.04
USP44-206ENST00000551837 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 PCDHA10Q9Y5I2 948 aa8.56□□□□□ -1.04
USP44-206ENST00000551837 COL11A1P12107 1806 aaPredicted RBP8.55□□□□□ -1.04
USP44-206ENST00000551837 SMCHD1A6NHR9 2005 aa8.55□□□□□ -1.04
USP44-206ENST00000551837 A0A1B0GVL5 298 aa8.55□□□□□ -1.04
USP44-206ENST00000551837 WDR64B1ANS9 1081 aa8.55□□□□□ -1.04
USP44-206ENST00000551837 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms