RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 GJA10Q969M2 543 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 CYP3A7-CYP3A51PA0A087WV96 503 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 WNT7AO00755 349 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 ZEB2O60315 1214 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 CYP3A7P24462 503 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 PSMC6P62333 389 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 PURAQ00577 322 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 METTL7BQ6UX53 244 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 SPRYD3Q8NCJ5 442 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 PPTC7Q8NI37 304 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 FOXP1Q9H334 677 aaPredicted RBP17.22■□□□□ 0.35
SMARCD1-211ENST00000551497 MSH4O15457 936 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 DHX15O43143 795 aaKnown RBP17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 LRRC26Q2I0M4 334 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 GIMAP8Q8ND71 665 aaPredicted RBP17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 GPR20Q99678 358 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 ZNF577Q9BSK1 485 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 STARD7Q9NQZ5 370 aa17.21■□□□□ 0.35
SMARCD1-211ENST00000551497 GRIN2DO15399 1336 aa17.21■□□□□ 0.34
SMARCD1-211ENST00000551497 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 H3BQV1 296 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 IPO5O00410 1097 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 SLC37A4O43826 429 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 KPNA6O60684 536 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 GNL2Q13823 731 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 DGKDQ16760 1214 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 Q4G0T1 1027 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 DDX25Q9UHL0 483 aaKnown RBP17.2■□□□□ 0.34
SMARCD1-211ENST00000551497 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 CCNE2O96020 404 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 PPP4R3AQ6IN85 833 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 MOXD1Q6UVY6 613 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 NOSTRINQ8IVI9 506 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 DPF3Q92784 378 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 KAT2BQ92831 832 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 JPH1Q9HDC5 661 aaPredicted RBP17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 SLC9A2Q9UBY0 812 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 NFASCO94856 1347 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 ELP1O95163 1332 aa17.19■□□□□ 0.34
SMARCD1-211ENST00000551497 ZNF286BP0CG31 522 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 HOXD8P13378 290 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 SYT1P21579 422 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 SETQ01105 290 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 UTP14CQ5TAP6 766 aaKnown RBP17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 SEPT1Q8WYJ6 367 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 SLC5A5Q92911 643 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 C16orf70Q9BSU1 422 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 PDE4DIPQ5VU43 2346 aa17.18■□□□□ 0.34
SMARCD1-211ENST00000551497 CABYRO75952 493 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 HSP90AA1P07900 732 aaKnown RBP17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 CDK7P50613 346 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 TOB1P50616 345 aaPredicted RBP17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 RTP1P59025 263 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 ACTR2P61160 394 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 SNX17Q15036 470 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 ZNF174Q15697 407 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 NBPF20Q3BBV1 942 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 ETNPPLQ8TBG4 499 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 HAS1Q92839 578 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 TBC1D22BQ9NU19 505 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
SMARCD1-211ENST00000551497 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 ARVCFO00192 962 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 LGALS2P05162 132 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 GCFC2P16383 781 aaKnown RBP17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 MCM7P33993 719 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 TLE2Q04725 743 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 NBR1Q14596 966 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 TRIM50Q86XT4 487 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 SLC43A3Q8NBI5 491 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 PCYT2Q99447 389 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 ATP11BQ9Y2G3 1177 aa17.16■□□□□ 0.34
SMARCD1-211ENST00000551497 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
SMARCD1-211ENST00000551497 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
SMARCD1-211ENST00000551497 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms