RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 STK3Q13188 491 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 NTRK3Q16288 839 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 PTGISQ16647 500 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 CAGE1Q8TC20 777 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 TNPO1Q92973 898 aaKnown RBP15.2■□□□□ 0.02
CEP290-205ENST00000550962 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 ALG1Q9BT22 464 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
CEP290-205ENST00000550962 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
CEP290-205ENST00000550962 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
CEP290-205ENST00000550962 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 H3BRB1 525 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 PARNO95453 639 aaKnown RBP15.19■□□□□ 0.02
CEP290-205ENST00000550962 ITGB5P18084 799 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 ITGB8P26012 769 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 CYP2C18P33260 490 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
CEP290-205ENST00000550962 ARHGAP4P98171 946 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 SETQ01105 290 aaPredicted RBP15.19■□□□□ 0.02
CEP290-205ENST00000550962 SHHQ15465 462 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 PKN1Q16512 942 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 NIPA1Q7RTP0 329 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 WASF1Q92558 559 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 KAT2BQ92831 832 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
CEP290-205ENST00000550962 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 TRIOBPQ9H2D6 2365 aa15.19■□□□□ 0.02
CEP290-205ENST00000550962 HAS3O00219 553 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 LGALS2P05162 132 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 CSF2RAP15509 400 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 SP4Q02446 784 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 SEMA3FQ13275 785 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 AFAP1L1Q8TED9 768 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 SEPT1Q8WYJ6 367 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 GPR20Q99678 358 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
CEP290-205ENST00000550962 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 DNAH12Q6ZR08 3092 aa15.18■□□□□ 0.02
CEP290-205ENST00000550962 NFASCO94856 1347 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 STK36Q9NRP7 1315 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 PFKFB2O60825 505 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 CYP2C9P11712 490 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 ACTN1P12814 892 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 KCNA2P16389 499 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 NEK4P51957 841 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 AK2P54819 239 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 CCL23P55773 120 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 PGBD1Q96JS3 809 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 C16orf70Q9BSU1 422 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 AZI2Q9H6S1 392 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 TMEM260Q9NX78 707 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
CEP290-205ENST00000550962 FGBP02675 491 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 CYP3A4P08684 503 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 TCF7P36402 384 aaPredicted RBP15.16■□□□□ 0.02
CEP290-205ENST00000550962 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
CEP290-205ENST00000550962 PTK7Q13308 1070 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 C9orf50Q5SZB4 431 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 UTP14CQ5TAP6 766 aaKnown RBP15.16■□□□□ 0.02
CEP290-205ENST00000550962 GDF6Q6KF10 455 aaPredicted RBP15.16■□□□□ 0.02
CEP290-205ENST00000550962 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 GLG1Q92896 1179 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 LARP6Q9BRS8 491 aaKnown RBP15.16■□□□□ 0.02
CEP290-205ENST00000550962 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 ERAP1Q9NZ08 941 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 PKD2L1Q9P0L9 805 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 SLC9A2Q9UBY0 812 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 PCDHA4Q9UN74 947 aa15.16■□□□□ 0.02
CEP290-205ENST00000550962 MEIS1O00470 390 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 SCRN1Q12765 414 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.02
CEP290-205ENST00000550962 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 PCDH10Q9P2E7 1040 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 TPCN1Q9ULQ1 816 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 MYH7BA7E2Y1 1941 aa15.15■□□□□ 0.02
CEP290-205ENST00000550962 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.14■□□□□ 0.01
CEP290-205ENST00000550962 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.14■□□□□ 0.01
CEP290-205ENST00000550962 SOX1O00570 391 aaPredicted RBP15.14■□□□□ 0.01
CEP290-205ENST00000550962 ATP9AO75110 1047 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 PPFIA3O75145 1194 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 CAND2O75155 1236 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 RPLP2P05387 115 aaKnown RBP15.14■□□□□ 0.01
CEP290-205ENST00000550962 SMIM10L2AP0DMW4 78 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 SMIM10L2BP0DMW5 78 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 SELPP16109 830 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 USP11P51784 963 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 EPHB4P54760 987 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 RBL2Q08999 1139 aa15.14■□□□□ 0.01
CEP290-205ENST00000550962 TMEM240Q5SV17 173 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms