RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 NUP58Q9BVL2 599 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 MAGEF1Q9HAY2 307 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 LZTFL1Q9NQ48 299 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 TTLL3Q9Y4R7 772 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 ZNF609O15014 1411 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
NR4A1-215ENST00000550557 NDUFB10O96000 172 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PIK3CAP42336 1068 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 GABPAQ06546 454 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 TRIM14Q14142 442 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
NR4A1-215ENST00000550557 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
NR4A1-215ENST00000550557 CUEDC2Q9H467 287 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 ZNF827Q17R98 1081 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 NEDD4P46934 1319 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PPP6R2O75170 966 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 MMP1P03956 469 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PHKA2P46019 1235 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 ZNF302Q9NR11 478 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
NR4A1-215ENST00000550557 ORC4O43929 436 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 OATP04181 439 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 CLIC6Q96NY7 704 aa13.34□□□□□ -0.27
NR4A1-215ENST00000550557 TOPORSQ9NS56 1045 aaPredicted RBP13.34□□□□□ -0.27
NR4A1-215ENST00000550557 PNOCQ13519 176 aa13.33□□□□□ -0.27
NR4A1-215ENST00000550557 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.27
NR4A1-215ENST00000550557 SREK1Q8WXA9 508 aaKnown RBP13.33□□□□□ -0.27
NR4A1-215ENST00000550557 PSPC1Q8WXF1 523 aaKnown RBP13.33□□□□□ -0.27
NR4A1-215ENST00000550557 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.27
NR4A1-215ENST00000550557 CSRNP2Q9H175 543 aa13.33□□□□□ -0.27
NR4A1-215ENST00000550557 TMEM206Q9H813 350 aa13.33□□□□□ -0.27
NR4A1-215ENST00000550557 NYAP2Q9P242 653 aa13.33□□□□□ -0.27
NR4A1-215ENST00000550557 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 IQCGQ9H095 443 aaKnown RBP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 BCL9O00512 1426 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 STAT1P42224 750 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 BAATQ14032 418 aaPredicted RBP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 KCNB2Q92953 911 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 PARVGQ9HBI0 331 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 NLRC4Q9NPP4 1024 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 SH3GLB2Q9NR46 395 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 PPP2R3BQ9Y5P8 575 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 GRM4Q14833 912 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 GLT1D1Q96MS3 346 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 FAM207AQ9NSI2 230 aaPredicted RBP13.33□□□□□ -0.28
NR4A1-215ENST00000550557 GINM1Q9NU53 330 aa13.33□□□□□ -0.28
NR4A1-215ENST00000550557 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 IVLP07476 585 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 MAPK6Q16659 721 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
NR4A1-215ENST00000550557 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 NDC80O14777 642 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 SFNP31947 248 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 RGS2P41220 211 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 DDR1Q08345 913 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 C11orf57Q6ZUT1 292 aaPredicted RBP13.32□□□□□ -0.28
NR4A1-215ENST00000550557 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
NR4A1-215ENST00000550557 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 ATP6V0A4Q9HBG4 840 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 STK17AQ9UEE5 414 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
NR4A1-215ENST00000550557 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
NR4A1-215ENST00000550557 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 RNF180Q86T96 592 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 PPP1R7Q15435 360 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 GNASQ5JWF2 1037 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 SCYL2Q6P3W7 929 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
NR4A1-215ENST00000550557 VPS33BQ9H267 617 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms