RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TTLL4Q14679 1199 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
NEK3-201ENST00000550331 ASPRV1Q53RT3 343 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 PLEKHM2Q8IWE5 1019 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 PNMA1Q8ND90 353 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 VWCEQ96DN2 955 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 DSCC1Q9BVC3 393 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 KAT14Q9H8E8 782 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 DIAPH3Q9NSV4 1193 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 TRMT13Q9NUP7 481 aaKnown RBP8.91□□□□□ -0.98
NEK3-201ENST00000550331 PCDHA11Q9Y5I1 949 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 SLC4A7Q9Y6M7 1214 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 BRWD1Q9NSI6 2320 aa8.91□□□□□ -0.98
NEK3-201ENST00000550331 B4E1Z4 1266 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 KDM4AO75164 1064 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 GOLGA8HP0CJ92 632 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 CYP2C9P11712 490 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 MYOGP15173 224 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 KCNMA1Q12791 1236 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 IMMTQ16891 758 aaKnown RBP8.9□□□□□ -0.98
NEK3-201ENST00000550331 NBPF20Q3BBV1 942 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 USH1GQ495M9 461 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 KMT5BQ4FZB7 885 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 FAM47CQ5HY64 1035 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 CWC27Q6UX04 472 aaKnown RBP8.9□□□□□ -0.98
NEK3-201ENST00000550331 NSUN6Q8TEA1 469 aaKnown RBP8.9□□□□□ -0.98
NEK3-201ENST00000550331 SCLYQ96I15 445 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 IWS1Q96ST2 819 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 ZSCAN10Q96SZ4 725 aaPredicted RBP8.9□□□□□ -0.98
NEK3-201ENST00000550331 CNNM2Q9H8M5 875 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 CTNNA3Q9UI47 895 aa8.9□□□□□ -0.98
NEK3-201ENST00000550331 SCN5AQ14524 2016 aa8.9□□□□□ -0.99
NEK3-201ENST00000550331 LCTP09848 1927 aa8.9□□□□□ -0.99
NEK3-201ENST00000550331 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 FAM86C2PA6NEL3 165 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ZBBXA8MT70 800 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 RFXAPO00287 272 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 NR1I2O75469 434 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ARIH2O95376 493 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 GH1P01241 217 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 IGHDP01880 384 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 PARP1P09874 1014 aaKnown RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 IQCF3P0C7M6 154 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ACTN1P12814 892 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ATP2A2P16615 1042 aaKnown RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 BFSP2Q13515 415 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 CCDC62Q6P9F0 684 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ALYREFQ86V81 257 aaKnown RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ADGRF4Q8IZF3 695 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 RETREG2Q8NC44 543 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 PHOSPHO2Q8TCD6 241 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 SYTL5Q8TDW5 730 aaPredicted RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 COPS5Q92905 334 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 UBAC1Q9BSL1 405 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 KRT23Q9C075 422 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 UBA5Q9GZZ9 404 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 CPVLQ9H3G5 476 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 ZSWIM5Q9P217 1185 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 COG5Q9UP83 839 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 MRPL11Q9Y3B7 192 aaKnown RBP8.89□□□□□ -0.99
NEK3-201ENST00000550331 MTCH2Q9Y6C9 303 aa8.89□□□□□ -0.99
NEK3-201ENST00000550331 GPR37L1O60883 481 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 MMP3P08254 477 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 GHRHRQ02643 423 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 ARHGAP1Q07960 439 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 STXBP2Q15833 593 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 QRICH1Q2TAL8 776 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 DEFB128Q7Z7B8 93 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 FBXO11Q86XK2 927 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 CCDC155Q8N6L0 562 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 CAGE1Q8TC20 777 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 TAAR1Q96RJ0 339 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 SLC9A7Q96T83 725 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 RMDN3Q96TC7 470 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 JMJD4Q9H9V9 463 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 CERS4Q9HA82 394 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 COL20A1Q9P218 1284 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
NEK3-201ENST00000550331 COL4A4P53420 1690 aaPredicted RBP8.88□□□□□ -0.99
NEK3-201ENST00000550331 DHX16O60231 1041 aaKnown RBP8.87□□□□□ -0.99
NEK3-201ENST00000550331 EIF3JO75822 258 aaKnown RBP8.87□□□□□ -0.99
NEK3-201ENST00000550331 BAIAP3O94812 1187 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 PARNO95453 639 aaKnown RBP8.87□□□□□ -0.99
NEK3-201ENST00000550331 CASTP20810 708 aaKnown RBP8.87□□□□□ -0.99
NEK3-201ENST00000550331 HSD17B4P51659 736 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 LY6KQ17RY6 165 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 TMEM67Q5HYA8 995 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 IFIT1BQ5T764 474 aaKnown RBP8.87□□□□□ -0.99
NEK3-201ENST00000550331 SEPT14Q6ZU15 432 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 SAMD3Q8N6K7 520 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 AFAP1L1Q8TED9 768 aa8.87□□□□□ -0.99
NEK3-201ENST00000550331 TBC1D5Q92609 795 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms