RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 STAT3P40763 770 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 GRIA2P42262 883 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 ZNF445P59923 1031 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 SUMO1P63165 101 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 ADAT2Q7Z6V5 191 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 TRIM59Q8IWR1 403 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 CHST13Q8NET6 341 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 ADAMTS17Q8TE56 1095 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 ZBTB8AQ96BR9 441 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 IPO9Q96P70 1041 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 LGR4Q9BXB1 951 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 VPS11Q9H270 941 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 TYW1Q9NV66 732 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 DDX56Q9NY93 547 aaKnown RBP5.85□□□□□ -1.47
SNRPF-202ENST00000549580 AKT3Q9Y243 479 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
SNRPF-202ENST00000549580 MYCLP1P12525 358 aaPredicted RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 ITGA4P13612 1032 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 TRIM61Q5EBN2 209 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 POMZP3Q6PJE2 187 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 NSMFQ6X4W1 530 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 PPP1R14AQ96A00 147 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 DDX11Q96FC9 970 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 FCRL3Q96P31 734 aaPredicted RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 CAAP1Q9H8G2 361 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 INTS7Q9NVH2 962 aaKnown RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 NTMQ9P121 344 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 CGGBP1Q9UFW8 167 aaPredicted RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 ING1Q9UK53 422 aaPredicted RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 INVSQ9Y283 1065 aa5.84□□□□□ -1.47
SNRPF-202ENST00000549580 DIS3Q9Y2L1 958 aaKnown RBP5.84□□□□□ -1.47
SNRPF-202ENST00000549580 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 DLX3O60479 287 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 C6orf222P0C671 652 aaPredicted RBP5.83□□□□□ -1.48
SNRPF-202ENST00000549580 GLI4P10075 376 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 IFNGR1P15260 489 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 PLEKHG6Q3KR16 790 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 RNF180Q86T96 592 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 CRACR2BQ8N4Y2 399 aaPredicted RBP5.83□□□□□ -1.48
SNRPF-202ENST00000549580 MAPRE3Q9UPY8 281 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 SUGT1Q9Y2Z0 365 aa5.83□□□□□ -1.48
SNRPF-202ENST00000549580 MARCH6O60337 910 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 PDE8AO60658 829 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 HNRNPA0Q13151 305 aaKnown RBP5.82□□□□□ -1.48
SNRPF-202ENST00000549580 GRB10Q13322 594 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 RGL3Q3MIN7 710 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 CWF19L1Q69YN2 538 aaKnown RBP5.82□□□□□ -1.48
SNRPF-202ENST00000549580 GTF2IRD2BQ6EKJ0 949 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 GTF2IRD2Q86UP8 949 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 GSTCDQ8NEC7 633 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 ADCY4Q8NFM4 1077 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 BTN2A2Q8WVV5 523 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 CCDC140Q96MF4 163 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 PTCHD1Q96NR3 888 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 TRIM39Q9HCM9 518 aa5.82□□□□□ -1.48
SNRPF-202ENST00000549580 MAGEC2Q9UBF1 373 aaPredicted RBP5.82□□□□□ -1.48
SNRPF-202ENST00000549580 FAM83GA6ND36 823 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 PPP1R11O60927 126 aaPredicted RBP5.81□□□□□ -1.48
SNRPF-202ENST00000549580 SCG5P05408 212 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 PDGFRBP09619 1106 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 SDSP20132 328 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 SOX5P35711 763 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 GFRA1P56159 465 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 MAP4K2Q12851 820 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 TTLL7Q6ZT98 887 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 STK32CQ86UX6 486 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 PRPF38AQ8NAV1 312 aaKnown RBP5.81□□□□□ -1.48
SNRPF-202ENST00000549580 FAM126AQ9BYI3 521 aaPredicted RBP5.81□□□□□ -1.48
SNRPF-202ENST00000549580 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 KLHL42Q9P2K6 505 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 ATP8A1Q9Y2Q0 1164 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 RWDD3Q9Y3V2 267 aa5.81□□□□□ -1.48
SNRPF-202ENST00000549580 ZNF536O15090 1300 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 DNAJC8O75937 253 aaPredicted RBP5.8□□□□□ -1.48
SNRPF-202ENST00000549580 KCNH1O95259 989 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 POU3F2P20265 443 aaPredicted RBP5.8□□□□□ -1.48
SNRPF-202ENST00000549580 HOXC12P31275 282 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 GABREP78334 506 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 CYP4F3Q08477 520 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 SF1Q15637 639 aaKnown RBP5.8□□□□□ -1.48
SNRPF-202ENST00000549580 NTRK3Q16288 839 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 NOL9Q5SY16 702 aaKnown RBP5.8□□□□□ -1.48
SNRPF-202ENST00000549580 CYP2R1Q6VVX0 501 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 LRRTM3Q86VH5 581 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 FIBCD1Q8N539 461 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 SLC7A14Q8TBB6 771 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 TSPAN17Q96FV3 270 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 C1orf159Q96HA4 380 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 GORASP1Q9BQQ3 440 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 TARS2Q9BW92 718 aaKnown RBP5.8□□□□□ -1.48
SNRPF-202ENST00000549580 CYP26B1Q9NR63 512 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 SFMBT1Q9UHJ3 866 aa5.8□□□□□ -1.48
SNRPF-202ENST00000549580 EFCAB14O75071 495 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 AMHP03971 560 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 CD3EP07766 207 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 CNGA1P29973 690 aa5.79□□□□□ -1.48
SNRPF-202ENST00000549580 CDKN1CP49918 316 aaPredicted RBP5.79□□□□□ -1.48
SNRPF-202ENST00000549580 CACNB2Q08289 660 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms