RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 NEMFO60524 1076 aa29.84■■■□□ 2.37
CHPT1-204ENST00000549128 FARP2O94887 1054 aaPredicted RBP29.84■■■□□ 2.37
CHPT1-204ENST00000549128 GJB1P08034 283 aa29.84■■■□□ 2.37
CHPT1-204ENST00000549128 NEDD9Q14511 834 aa29.84■■■□□ 2.37
CHPT1-204ENST00000549128 C4orf32Q8N8J7 132 aa29.84■■■□□ 2.37
CHPT1-204ENST00000549128 DDX39AO00148 427 aaKnown RBP29.83■■■□□ 2.37
CHPT1-204ENST00000549128 ADAMTS4O75173 837 aa29.83■■■□□ 2.37
CHPT1-204ENST00000549128 GJA9P57773 515 aa29.83■■■□□ 2.37
CHPT1-204ENST00000549128 U2AF1L4Q8WU68 220 aaKnown RBP29.83■■■□□ 2.37
CHPT1-204ENST00000549128 ABHD8Q96I13 439 aa29.83■■■□□ 2.37
CHPT1-204ENST00000549128 MLXIPQ9HAP2 919 aa29.83■■■□□ 2.37
CHPT1-204ENST00000549128 Q9Y3F1 56 aa29.83■■■□□ 2.37
CHPT1-204ENST00000549128 KIAA0100Q14667 2235 aaKnown RBP29.82■■■□□ 2.36
CHPT1-204ENST00000549128 BEX3Q00994 111 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 SP4Q02446 784 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 HSDL1Q3SXM5 330 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 CHAMP1Q96JM3 812 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 MTMR9Q96QG7 549 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 UPF3AQ9H1J1 476 aaKnown RBP29.82■■■□□ 2.36
CHPT1-204ENST00000549128 CLIC4Q9Y696 253 aa29.82■■■□□ 2.36
CHPT1-204ENST00000549128 SGPL1O95470 568 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 PTGDRQ13258 359 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 CALCRLQ16602 461 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 METTL7BQ6UX53 244 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 AFG1LQ8WV93 481 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 EMID1Q96A84 441 aaPredicted RBP29.81■■■□□ 2.36
CHPT1-204ENST00000549128 AP5M1Q9H0R1 490 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 NFASCO94856 1347 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 PSMD10O75832 226 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 MYCNP04198 464 aaPredicted RBP29.81■■■□□ 2.36
CHPT1-204ENST00000549128 C6orf222P0C671 652 aaPredicted RBP29.81■■■□□ 2.36
CHPT1-204ENST00000549128 NUCB2P80303 420 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 LAMC2Q13753 1193 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 TNS4Q8IZW8 715 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 SPATA33Q96N06 139 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 USP28Q96RU2 1077 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 SDF4Q9BRK5 362 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 TMEM106CQ9BVX2 250 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 CRISPLD2Q9H0B8 497 aa29.81■■■□□ 2.36
CHPT1-204ENST00000549128 FRMPD3Q5JV73 1810 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 TBX3O15119 743 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 ORC2Q13416 577 aaPredicted RBP29.8■■■□□ 2.36
CHPT1-204ENST00000549128 SF3A1Q15459 793 aaKnown RBP29.8■■■□□ 2.36
CHPT1-204ENST00000549128 LRCH2Q5VUJ6 765 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 GIMAP8Q8ND71 665 aaPredicted RBP29.8■■■□□ 2.36
CHPT1-204ENST00000549128 FAM20AQ96MK3 541 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 JPH1Q9HDC5 661 aaPredicted RBP29.8■■■□□ 2.36
CHPT1-204ENST00000549128 TBC1D22BQ9NU19 505 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 TFIP11Q9UBB9 837 aaKnown RBP29.8■■■□□ 2.36
CHPT1-204ENST00000549128 OGDHLQ9ULD0 1010 aa29.8■■■□□ 2.36
CHPT1-204ENST00000549128 CCNE2O96020 404 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 GJA8P48165 433 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 CEBPZQ03701 1054 aaKnown RBP29.79■■■□□ 2.36
CHPT1-204ENST00000549128 LRRC41Q15345 812 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 KLHDC9Q8NEP7 349 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 RIT2Q99578 217 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 SLC9A2Q9UBY0 812 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 MYH15Q9Y2K3 1946 aa29.79■■■□□ 2.36
CHPT1-204ENST00000549128 MARCH6O60337 910 aa29.78■■■□□ 2.36
CHPT1-204ENST00000549128 GAS7O60861 476 aa29.78■■■□□ 2.36
CHPT1-204ENST00000549128 TXKP42681 527 aa29.78■■■□□ 2.36
CHPT1-204ENST00000549128 NKX3-2P78367 333 aa29.78■■■□□ 2.36
CHPT1-204ENST00000549128 FSCN1Q16658 493 aaKnown RBP29.78■■■□□ 2.36
CHPT1-204ENST00000549128 CIZ1Q9ULV3 898 aaPredicted RBP29.78■■■□□ 2.36
CHPT1-204ENST00000549128 A6NJR5 290 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 TFRCP02786 760 aaKnown RBP29.77■■■□□ 2.36
CHPT1-204ENST00000549128 OR52Z1P0C646 297 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 DNM1Q05193 864 aaKnown RBP29.77■■■□□ 2.36
CHPT1-204ENST00000549128 GNASQ5JWF2 1037 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 CCSAPQ6IQ19 270 aaPredicted RBP29.77■■■□□ 2.36
CHPT1-204ENST00000549128 B3GNT9Q6UX72 402 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 PPTC7Q8NI37 304 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 GPR20Q99678 358 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 TEKT3Q9BXF9 490 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 UNC45AQ9H3U1 944 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 SPC25Q9HBM1 224 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 VAV3Q9UKW4 847 aa29.77■■■□□ 2.36
CHPT1-204ENST00000549128 GSTTP1A0A1W2PQM5 241 aa29.76■■■□□ 2.35
CHPT1-204ENST00000549128 BAG4O95429 457 aaKnown RBP29.76■■■□□ 2.35
CHPT1-204ENST00000549128 MMP3P08254 477 aa29.76■■■□□ 2.35
CHPT1-204ENST00000549128 ATP2C1P98194 919 aaPredicted RBP29.76■■■□□ 2.35
CHPT1-204ENST00000549128 PTPAQ15257 358 aa29.76■■■□□ 2.35
CHPT1-204ENST00000549128 SLFN12Q8IYM2 578 aa29.76■■■□□ 2.35
CHPT1-204ENST00000549128 CHMP2AO43633 222 aa29.75■■■□□ 2.35
CHPT1-204ENST00000549128 MNX1P50219 401 aaPredicted RBP29.75■■■□□ 2.35
CHPT1-204ENST00000549128 ACTR2P61160 394 aa29.75■■■□□ 2.35
CHPT1-204ENST00000549128 IL17AQ16552 155 aa29.75■■■□□ 2.35
CHPT1-204ENST00000549128 RNF180Q86T96 592 aa29.75■■■□□ 2.35
CHPT1-204ENST00000549128 TTC12Q9H892 705 aaPredicted RBP29.75■■■□□ 2.35
CHPT1-204ENST00000549128 NOP56O00567 594 aaKnown RBP29.74■■■□□ 2.35
CHPT1-204ENST00000549128 CST5P28325 142 aaPredicted RBP29.74■■■□□ 2.35
CHPT1-204ENST00000549128 SPIRE1Q08AE8 756 aa29.74■■■□□ 2.35
CHPT1-204ENST00000549128 KCNA10Q16322 511 aa29.74■■■□□ 2.35
CHPT1-204ENST00000549128 ARRDC4Q8NCT1 418 aa29.74■■■□□ 2.35
CHPT1-204ENST00000549128 CHMP5Q9NZZ3 219 aa29.74■■■□□ 2.35
CHPT1-204ENST00000549128 PCDHA12Q9UN75 941 aa29.74■■■□□ 2.35
CHPT1-204ENST00000549128 EML1O00423 815 aa29.73■■■□□ 2.35
CHPT1-204ENST00000549128 EN2P19622 333 aaPredicted RBP29.73■■■□□ 2.35
CHPT1-204ENST00000549128 CPT1AP50416 773 aa29.73■■■□□ 2.35
CHPT1-204ENST00000549128 ZNF396Q96N95 335 aaPredicted RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms