RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 SYNRGQ9UMZ2 1314 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 ADAMTS4O75173 837 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 PSMD10O75832 226 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 GJB1P08034 283 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 GJA9P57773 515 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 LAMC2Q13753 1193 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 CALCRLQ16602 461 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 CYFIP1Q7L576 1253 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 DHX37Q8IY37 1157 aaKnown RBP23.86■■□□□ 1.41
CACNB3-210ENST00000548874 DEFB118Q96PH6 123 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 UIMC1Q96RL1 719 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 XPNPEP3Q9NQH7 507 aa23.86■■□□□ 1.41
CACNB3-210ENST00000548874 CTAGE5O15320 804 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 DYNC1LI2O43237 492 aaPredicted RBP23.85■■□□□ 1.41
CACNB3-210ENST00000548874 OR6J1Q8NGC5 347 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 GJA10Q969M2 543 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 USP28Q96RU2 1077 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 SDF4Q9BRK5 362 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 CRISPLD2Q9H0B8 497 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 CHMP5Q9NZZ3 219 aa23.85■■□□□ 1.41
CACNB3-210ENST00000548874 OR52Z1P0C646 297 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 ATP2C1P98194 919 aaPredicted RBP23.84■■□□□ 1.41
CACNB3-210ENST00000548874 PTGDRQ13258 359 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 SF3A1Q15459 793 aaKnown RBP23.84■■□□□ 1.41
CACNB3-210ENST00000548874 LRCH2Q5VUJ6 765 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 B3GNT9Q6UX72 402 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 SLFN12Q8IYM2 578 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 FTOQ9C0B1 505 aaKnown RBP eCLIP23.84■■□□□ 1.41
CACNB3-210ENST00000548874 AP5M1Q9H0R1 490 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 MLXIPQ9HAP2 919 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 JPH1Q9HDC5 661 aaPredicted RBP23.84■■□□□ 1.41
CACNB3-210ENST00000548874 CLIC4Q9Y696 253 aa23.84■■□□□ 1.41
CACNB3-210ENST00000548874 DOCK5Q9H7D0 1870 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 CENPFP49454 3210 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 LAD1O00515 517 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 BAG4O95429 457 aaKnown RBP23.83■■□□□ 1.41
CACNB3-210ENST00000548874 BMP15O95972 392 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 PGK1P00558 417 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 CST5P28325 142 aaPredicted RBP23.83■■□□□ 1.41
CACNB3-210ENST00000548874 PTPAQ15257 358 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 HSDL1Q3SXM5 330 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 KLHDC9Q8NEP7 349 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 PPTC7Q8NI37 304 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 U2AF1L4Q8WU68 220 aaKnown RBP23.83■■□□□ 1.41
CACNB3-210ENST00000548874 SPATA33Q96N06 139 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 ZNF396Q96N95 335 aaPredicted RBP23.83■■□□□ 1.41
CACNB3-210ENST00000548874 TEKT3Q9BXF9 490 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 POLR3EQ9NVU0 708 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 SLC9A2Q9UBY0 812 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 VAV3Q9UKW4 847 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 OGDHLQ9ULD0 1010 aa23.83■■□□□ 1.41
CACNB3-210ENST00000548874 MYADML2A6NDP7 307 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 A6NJR5 290 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 SORBS3O60504 671 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 GAS7O60861 476 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 SGPL1O95470 568 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 CCNE2O96020 404 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 HOXD8P13378 290 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-210ENST00000548874 PRPHP41219 470 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 NASPP49321 788 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-210ENST00000548874 IRX5P78411 483 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-210ENST00000548874 ATL3Q6DD88 541 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 AFG1LQ8WV93 481 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 SPC25Q9HBM1 224 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 TELO2Q9Y4R8 837 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 ATP6V1DQ9Y5K8 247 aa23.82■■□□□ 1.4
CACNB3-210ENST00000548874 MORC2Q9Y6X9 1032 aaPredicted RBP23.82■■□□□ 1.4
CACNB3-210ENST00000548874 DDX39AO00148 427 aaKnown RBP23.81■■□□□ 1.4
CACNB3-210ENST00000548874 C6orf222P0C671 652 aaPredicted RBP23.81■■□□□ 1.4
CACNB3-210ENST00000548874 GJA8P48165 433 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 KRT76Q01546 638 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 SPIRE1Q08AE8 756 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 FSCN1Q16658 493 aaKnown RBP23.81■■□□□ 1.4
CACNB3-210ENST00000548874 CCSAPQ6IQ19 270 aaPredicted RBP23.81■■□□□ 1.4
CACNB3-210ENST00000548874 GPR20Q99678 358 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 TMEM106CQ9BVX2 250 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 CEP131Q9UPN4 1083 aa23.81■■□□□ 1.4
CACNB3-210ENST00000548874 MARCH6O60337 910 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 MMP3P08254 477 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 TXKP42681 527 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 CPT1AP50416 773 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 DNM1Q05193 864 aaKnown RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 PPP2R5CQ13362 524 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 LRRC41Q15345 812 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 FOXD4L6Q3SYB3 417 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 ZNF746Q6NUN9 644 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 FOXD4L3Q6VB84 417 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 ABHD8Q96I13 439 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 UNC45AQ9H3U1 944 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 TTC12Q9H892 705 aaPredicted RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 TFIP11Q9UBB9 837 aaKnown RBP23.8■■□□□ 1.4
CACNB3-210ENST00000548874 ELP1O95163 1332 aa23.8■■□□□ 1.4
CACNB3-210ENST00000548874 GSTTP1A0A1W2PQM5 241 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 ATG7O95352 703 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 CAPN2P17655 700 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 ACTR2P61160 394 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 BEX3Q00994 111 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 ARL6IP4Q66PJ3 421 aaKnown RBP23.79■■□□□ 1.4
CACNB3-210ENST00000548874 RNF180Q86T96 592 aa23.79■■□□□ 1.4
CACNB3-210ENST00000548874 ARRDC4Q8NCT1 418 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms