RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PABPC1P11940 636 aaKnown RBP6.53□□□□□ -1.36
CCDC38-206ENST00000548771 MLLT6P55198 1093 aaPredicted RBP6.53□□□□□ -1.36
CCDC38-206ENST00000548771 STYK1Q6J9G0 422 aa6.53□□□□□ -1.36
CCDC38-206ENST00000548771 KCNT2Q6UVM3 1135 aa6.53□□□□□ -1.36
CCDC38-206ENST00000548771 LBX2Q6XYB7 198 aa6.53□□□□□ -1.36
CCDC38-206ENST00000548771 OTOP3Q7RTS5 596 aa6.53□□□□□ -1.36
CCDC38-206ENST00000548771 YTHDC1Q96MU7 727 aaKnown RBP6.53□□□□□ -1.36
CCDC38-206ENST00000548771 ZFYVE21Q9BQ24 234 aa6.53□□□□□ -1.36
CCDC38-206ENST00000548771 MATN3O15232 486 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 PRODHO43272 600 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 PLATP00750 562 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 COL6A1P12109 1028 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 IL13P35225 146 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 MAGEA10P43363 369 aaPredicted RBP6.52□□□□□ -1.37
CCDC38-206ENST00000548771 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
CCDC38-206ENST00000548771 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 USP53Q70EK8 1073 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 LGI4Q8N135 537 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 PIP4K2CQ8TBX8 421 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 ZCCHC14Q8WYQ9 949 aaKnown RBP6.52□□□□□ -1.37
CCDC38-206ENST00000548771 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 INVSQ9Y283 1065 aa6.52□□□□□ -1.37
CCDC38-206ENST00000548771 ASXL2Q76L83 1435 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 KRIT1O00522 736 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 B4GALT3O60512 393 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 MAFKO60675 156 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 FSHBP01225 129 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 ADAM17P78536 824 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 YOD1Q5VVQ6 348 aaPredicted RBP6.51□□□□□ -1.37
CCDC38-206ENST00000548771 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 NSMFQ6X4W1 530 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 SLC16A11Q8NCK7 471 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 UHMK1Q8TAS1 419 aaKnown RBP6.51□□□□□ -1.37
CCDC38-206ENST00000548771 TELO2Q9Y4R8 837 aa6.51□□□□□ -1.37
CCDC38-206ENST00000548771 SLC27A2O14975 620 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 ADCY3O60266 1144 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 EPHA5P54756 1037 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 GPR85P60893 370 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 TRIM48Q8IWZ4 208 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 LRRC47Q8N1G4 583 aaKnown RBP6.5□□□□□ -1.37
CCDC38-206ENST00000548771 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
CCDC38-206ENST00000548771 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 YIPF4Q9BSR8 244 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 RBPJLQ9UBG7 517 aa6.5□□□□□ -1.37
CCDC38-206ENST00000548771 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 OVOL3O00110 214 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC38-206ENST00000548771 KIZQ2M2Z5 673 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 SPATC1Q76KD6 591 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 IFNL3Q8IZI9 196 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 DTX3Q8N9I9 347 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC38-206ENST00000548771 ZSWIM3Q96MP5 696 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 SAMD11Q96NU1 681 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 CLIC6Q96NY7 704 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 SPATA9Q9BWV2 254 aa6.49□□□□□ -1.37
CCDC38-206ENST00000548771 BLACEA4D250 179 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 FAHP16930 419 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 GRK2P25098 689 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 GRK3P35626 688 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 ZC3H6P61129 1189 aaKnown RBP6.48□□□□□ -1.37
CCDC38-206ENST00000548771 RASGRF1Q13972 1273 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 RBM12BQ8IXT5 1001 aaKnown RBP6.48□□□□□ -1.37
CCDC38-206ENST00000548771 SH3RF2Q8TEC5 729 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 SCAND2PQ9GZW5 306 aaPredicted RBP6.48□□□□□ -1.37
CCDC38-206ENST00000548771 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
CCDC38-206ENST00000548771 TCRBV5S4A2TA0A5A2 114 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 WNT9AO14904 365 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 PDPK1O15530 556 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 CYP7B1O75881 506 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 KLHL18O94889 574 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 LTFP02788 710 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 SOD2P04179 222 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 COL6A2P12110 1019 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 GRIN1Q05586 938 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
CCDC38-206ENST00000548771 TUSC3Q13454 348 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 PAN2Q504Q3 1202 aaKnown RBP6.47□□□□□ -1.37
CCDC38-206ENST00000548771 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 PRAMEF18Q5VWM3 479 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 BORAQ6PGQ7 559 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 TMC5Q6UXY8 1006 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 FAM124AQ86V42 546 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 SMPD4Q9NXE4 827 aa6.47□□□□□ -1.37
CCDC38-206ENST00000548771 E9PSI1 815 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 ACOT7O00154 380 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 STK10O94804 968 aaKnown RBP6.46□□□□□ -1.38
CCDC38-206ENST00000548771 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
CCDC38-206ENST00000548771 NBPF6Q5VWK0 638 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 NBPF4Q96M43 638 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 TMEM168Q9H0V1 697 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 IPPKQ9H8X2 491 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 L2HGDHQ9H9P8 463 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 DLL4Q9NR61 685 aa6.46□□□□□ -1.38
CCDC38-206ENST00000548771 PPP4R1LQ9P1A2 415 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms