RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TAP1Q03518 808 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 CCDC85BQ15834 202 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 ZNF618Q5T7W0 954 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 RAB11FIP4Q86YS3 637 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 TMTC2Q8N394 836 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 CUL5Q93034 780 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 LRRC2Q9BYS8 371 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 RTEL1Q9NZ71 1219 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 H3BRB1 525 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 NOP56O00567 594 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 CALM1P0DP23 149 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 CALM2P0DP24 149 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 CALM3P0DP25 149 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 NEDD9Q14511 834 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 XRRA1Q6P2D8 792 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 TMTC3Q6ZXV5 915 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 CYFIP1Q7L576 1253 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 TMCO2Q7Z6W1 182 aaPredicted RBP20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 SGMS1Q86VZ5 419 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 SYMPKQ92797 1274 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 GPR20Q99678 358 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 TUT1Q9H6E5 874 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 CERS4Q9HA82 394 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 TELO2Q9Y4R8 837 aa20.04■□□□□ 0.8
CHMP1A-205ENST00000548650 C17orf102A2RUQ5 167 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 SMIM10L2AP0DMW4 78 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 SMIM10L2BP0DMW5 78 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 SPRED2Q7Z698 418 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 MICU3Q86XE3 530 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 NCOR1O75376 2440 aa20.03■□□□□ 0.8
CHMP1A-205ENST00000548650 MUC3AQ02505 3323 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 hCG_1642624A0A1W2PR95 340 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 LCHNA4D1U4 455 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 KIF28PB7ZC32 967 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 RFXAPO00287 272 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 TLL1O43897 1013 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 MKRN4PQ13434 485 aaPredicted RBP20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 CENPQQ7L2Z9 268 aaPredicted RBP20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 ATXN2LQ8WWM7 1075 aaKnown RBP20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 SENP7Q9BQF6 1050 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 USP26Q9BXU7 913 aa20.02■□□□□ 0.8
CHMP1A-205ENST00000548650 KAT6AQ92794 2004 aa20.02■□□□□ 0.79
CHMP1A-205ENST00000548650 EMSYQ7Z589 1322 aa20.02■□□□□ 0.79
CHMP1A-205ENST00000548650 LGR5O75473 907 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 POU3F3P20264 500 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 THPOP40225 353 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 UBE2SQ16763 222 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 MICALL1Q8N3F8 863 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 ARNTL2Q8WYA1 636 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 ATP6V0A1Q93050 837 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 PSTPIP2Q9H939 334 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 MTCH2Q9Y6C9 303 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 CNTNAP5Q8WYK1 1306 aa20.01■□□□□ 0.79
CHMP1A-205ENST00000548650 TREHO43280 583 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 EFCAB14O75071 495 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 GJB5O95377 273 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 KCNA2P16389 499 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 SP4Q02446 784 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 APOA5Q6Q788 366 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 NLRX1Q86UT6 975 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 GPRASP2Q96D09 838 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 ASB2Q96Q27 587 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 RNPEPQ9H4A4 650 aa20■□□□□ 0.79
CHMP1A-205ENST00000548650 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
CHMP1A-205ENST00000548650 RSPH10B2B2RC85 870 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 RSPH10BP0C881 870 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 ITGB5P18084 799 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 IKBKEQ14164 716 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 RNF20Q5VTR2 975 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 KRT40Q6A162 431 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 CCDC82Q8N4S0 544 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 COL4A6Q14031 1691 aa19.99■□□□□ 0.79
CHMP1A-205ENST00000548650 GTPBP6O43824 516 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 CAND2O75155 1236 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 ADAM17P78536 824 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 DBF4BQ8NFT6 615 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 LMBR1Q8WVP7 490 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 NEK1Q96PY6 1258 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 SETD4Q9NVD3 440 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 UBIAD1Q9Y5Z9 338 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 BRWD1Q9NSI6 2320 aa19.98■□□□□ 0.79
CHMP1A-205ENST00000548650 LPXNO60711 386 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 ATP9AO75110 1047 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 CTSHP09668 335 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 MRPS5P82675 430 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 EXOSC10Q01780 885 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 FUT2Q10981 343 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 GRB10Q13322 594 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 PLEKHG4Q58EX7 1191 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 UTP14CQ5TAP6 766 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 WWC2Q6AWC2 1192 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 TYW1BQ6NUM6 668 aa19.97■□□□□ 0.79
CHMP1A-205ENST00000548650 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms