RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 KPNA6O60684 536 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 ATP9AO75110 1047 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 TDP2O95551 362 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 ASGR1P07306 291 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 MMP3P08254 477 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 ARP10275 920 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 COL6A1P12109 1028 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 PTGS1P23219 599 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 ACLYP53396 1101 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 BEX3Q00994 111 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 KCNA10Q16322 511 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 SDF4Q9BRK5 362 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 C11orf49Q9H6J7 331 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
CALCOCO1-208ENST00000547988 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 KIF28PB7ZC32 967 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 CABYRO75952 493 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 RGS19P49795 217 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 DGKDQ16760 1214 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 SPATA33Q96N06 139 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 ZNF577Q9BSK1 485 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 JPH1Q9HDC5 661 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 NOL7Q9UMY1 257 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-208ENST00000547988 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 PPFIA4O75335 1185 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 CAPN15O75808 1086 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 SYT1P21579 422 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLC5A5Q92911 643 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 RIT2Q99578 217 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 PKD2L1Q9P0L9 805 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLC9A2Q9UBY0 812 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 TCEAL9Q9UHQ7 104 aa12.89□□□□□ -0.35
CALCOCO1-208ENST00000547988 ELP1O95163 1332 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 EVPLQ92817 2033 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 TBX3O15119 743 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 MSH4O15457 936 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 STX6O43752 255 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLC37A4O43826 429 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 SORBS3O60504 671 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 CXCL17Q6UXB2 119 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 GPR20Q99678 358 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 BCAS3Q9H6U6 928 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 STARD7Q9NQZ5 370 aa12.88□□□□□ -0.35
CALCOCO1-208ENST00000547988 DHX15O43143 795 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 NEMFO60524 1076 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 GAS7O60861 476 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 MYL3P08590 195 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 KRT76Q01546 638 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 SNX17Q15036 470 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 SEPT1Q8WYJ6 367 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 LTBP2Q14767 1821 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 TANC1Q9C0D5 1861 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
CALCOCO1-208ENST00000547988 TNRC18O15417 2968 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 DDX39AO00148 427 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 WNT7AO00755 349 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 PSMD10O75832 226 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 F2P00734 622 aa12.86□□□□□ -0.35
CALCOCO1-208ENST00000547988 LGALS2P05162 132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms