RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 RPAINQ86UA6 219 aa15.75■□□□□ 0.11
CCDC59-202ENST00000547758 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
CCDC59-202ENST00000547758 TOP1MTQ969P6 601 aa15.75■□□□□ 0.11
CCDC59-202ENST00000547758 UBA5Q9GZZ9 404 aa15.75■□□□□ 0.11
CCDC59-202ENST00000547758 KMT2EQ8IZD2 1858 aa15.75■□□□□ 0.11
CCDC59-202ENST00000547758 NCK2O43639 380 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 UPP2O95045 317 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 FGAP02671 866 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 LTBRP36941 435 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 SMAD2Q15796 467 aaKnown RBP15.74■□□□□ 0.11
CCDC59-202ENST00000547758 SEPT8Q92599 483 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 POP1Q99575 1024 aaKnown RBP15.74■□□□□ 0.11
CCDC59-202ENST00000547758 MUTYHQ9UIF7 546 aa15.74■□□□□ 0.11
CCDC59-202ENST00000547758 KIAA1671Q9BY89 1806 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 PPFIA4O75335 1185 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 NR3C2P08235 984 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 MX1P20591 662 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 HERC4Q5GLZ8 1057 aaPredicted RBP15.73■□□□□ 0.11
CCDC59-202ENST00000547758 PXMP2Q9NR77 195 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 CFAP54Q96N23 3096 aa15.73■□□□□ 0.11
CCDC59-202ENST00000547758 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.72■□□□□ 0.11
CCDC59-202ENST00000547758 C17orf102A2RUQ5 167 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 CTNNB1P35222 781 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 HAND2P61296 217 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 CLUL1Q15846 466 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 CTC1Q2NKJ3 1217 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 MYSM1Q5VVJ2 828 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 ADGRF4Q8IZF3 695 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 PHOX2BQ99453 314 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 IFIH1Q9BYX4 1025 aaKnown RBP15.72■□□□□ 0.11
CCDC59-202ENST00000547758 HELLSQ9NRZ9 838 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 MRPL11Q9Y3B7 192 aaKnown RBP15.72■□□□□ 0.11
CCDC59-202ENST00000547758 TTC3P53804 2025 aa15.72■□□□□ 0.11
CCDC59-202ENST00000547758 CACNA1HO95180 2353 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 MBTPS2O43462 519 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 SORBS3O60504 671 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 CAND2O75155 1236 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 GGPS1O95749 300 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 CTSHP09668 335 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 HSPD1P10809 573 aaKnown RBP15.71■□□□□ 0.11
CCDC59-202ENST00000547758 CHRM1P11229 460 aaPredicted RBP15.71■□□□□ 0.11
CCDC59-202ENST00000547758 PCP11498 1178 aaKnown RBP15.71■□□□□ 0.11
CCDC59-202ENST00000547758 HOXC8P31273 242 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 DLX2Q07687 328 aaPredicted RBP15.71■□□□□ 0.11
CCDC59-202ENST00000547758 HYAL1Q12794 435 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 QRICH1Q2TAL8 776 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 CELF3Q5SZQ8 465 aaKnown RBP15.71■□□□□ 0.11
CCDC59-202ENST00000547758 MFSD6Q6ZSS7 791 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 RNF135Q8IUD6 432 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 PRSS33Q8NF86 280 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 C16orf70Q9BSU1 422 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 OSBPL7Q9BZF2 842 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.11
CCDC59-202ENST00000547758 C5orf67F2Z3F1 127 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 TREHO43280 583 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 RGS20O76081 388 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 CFBP00751 764 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 RB1P06400 928 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 SMAD4Q13485 552 aaKnown RBP15.7■□□□□ 0.1
CCDC59-202ENST00000547758 KCNV1Q6PIU1 500 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 FIBCD1Q8N539 461 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 EDAQ92838 391 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 APBB2Q92870 758 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
CCDC59-202ENST00000547758 C11orf84Q9BUA3 381 aaPredicted RBP15.7■□□□□ 0.1
CCDC59-202ENST00000547758 LOXHD1Q8IVV2 1947 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 A0A0D9SFI3 127 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 H3BRB1 525 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 GRM6O15303 877 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 TBX10O75333 385 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 SMIM10L2AP0DMW4 78 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 SMIM10L2BP0DMW5 78 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 MYCLP12524 364 aaPredicted RBP15.69■□□□□ 0.1
CCDC59-202ENST00000547758 UBA1P22314 1058 aaKnown RBP15.69■□□□□ 0.1
CCDC59-202ENST00000547758 HSD17B4P51659 736 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 PTPN5P54829 565 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 MCMDC2Q4G0Z9 681 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 DGKHQ86XP1 1220 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 ESR2Q92731 530 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 IL17RAQ96F46 866 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 FAM227BQ96M60 508 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 PDCD2LQ9BRP1 358 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 TUT1Q9H6E5 874 aaKnown RBP15.69■□□□□ 0.1
CCDC59-202ENST00000547758 RWDD3Q9Y3V2 267 aa15.69■□□□□ 0.1
CCDC59-202ENST00000547758 BAZ2BQ9UIF8 2168 aaKnown RBP15.69■□□□□ 0.1
CCDC59-202ENST00000547758 NEDD4P46934 1319 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 STXBP3O00186 592 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
CCDC59-202ENST00000547758 LINC00271P0C7V0 271 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms