RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 SRRDQ9UH36 339 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 FAM237AA0A1B0GTK4 181 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 SFNP31947 248 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 PRKCZQ05513 592 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 GRIN1Q05586 938 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 FAM160A1Q05DH4 1040 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 OTOP1Q7RTM1 612 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 RDM1Q8NG50 284 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 SYMPKQ92797 1274 aaKnown RBP17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 CCDC34Q96HJ3 373 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
TRAFD1-203ENST00000547063 KDM3AQ9Y4C1 1321 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 NKRFO15226 690 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 DHX15O43143 795 aaKnown RBP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 PFKFB1P16118 471 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 KCNA2P16389 499 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 JAK3P52333 1124 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 SPIRE1Q08AE8 756 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 SEMA3FQ13275 785 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 ITGB3BPQ13352 177 aaPredicted RBP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 ACVR2BQ13705 512 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 ZNF746Q6NUN9 644 aaPredicted RBP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 KCTD17Q8N5Z5 321 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 RASSF8Q8NHQ8 419 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 CALML4Q96GE6 196 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 KCNH3Q9ULD8 1083 aa17.81■□□□□ 0.44
TRAFD1-203ENST00000547063 A0A1B0GVL5 298 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 POTEMA6NI47 508 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 ATP9AO75110 1047 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 SYKP43405 635 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 SPECC1Q5M775 1068 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 IQSEC1Q6DN90 963 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 CABP7Q86V35 215 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 SMAP1Q8IYB5 467 aaPredicted RBP17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 NEK9Q8TD19 979 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 GJA10Q969M2 543 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 EPSTI1Q96J88 318 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 CDK5RAP3Q96JB5 506 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 NT5C3AQ9H0P0 336 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 JPH1Q9HDC5 661 aaPredicted RBP17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 SLC9A2Q9UBY0 812 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 HPSEQ9Y251 543 aa17.8■□□□□ 0.44
TRAFD1-203ENST00000547063 ZSWIM8A7E2V4 1837 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 WDR64B1ANS9 1081 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 KINO60870 393 aaKnown RBP17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 IGHA2P01877 340 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 MUTP22033 750 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 UBA1P22314 1058 aaKnown RBP17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 EPHA7Q15375 998 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 CCL14Q16627 93 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 TAPT1Q6NXT6 567 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 CCDC62Q6P9F0 684 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 B3GNT9Q6UX72 402 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 MIER3Q7Z3K6 550 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 RAET1EQ8TD07 263 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 PXYLP1Q8TE99 480 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 UIMC1Q96RL1 719 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 KATNBL1Q9H079 304 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 UNC45AQ9H3U1 944 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
TRAFD1-203ENST00000547063 DDX39AO00148 427 aaKnown RBP17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 TRAK2O60296 914 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 RPA1P27694 616 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 CCT6AP40227 531 aaKnown RBP17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 NDUFA8P51970 172 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 IQUBQ8NA54 791 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 GOLPH3LQ9H4A5 285 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 FLRT1Q9NZU1 646 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 PCDHA10Q9Y5I2 948 aa17.78■□□□□ 0.44
TRAFD1-203ENST00000547063 CHMP2AO43633 222 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 DKC1O60832 514 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 ZNF202O95125 648 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 GGPS1O95749 300 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 GH1P01241 217 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 LIG1P18858 919 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 CYP2C19P33261 490 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 SP2Q02086 613 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms