RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	SH2D3C	Q8N5H7	860 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CNBD1	Q8NA66	436 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CCHCR1	Q8TD31	782 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	ZNF384	Q8TF68	577 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	RNPC3	Q96LT9	517 aa	Known RBP	10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	RMDN2	Q96LZ7	410 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	NLRP3	Q96P20	1036 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	ZKSCAN3	Q9BRR0	538 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	RHBDL2	Q9NX52	303 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	TAF1	P21675	1872 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	MAST2	Q6P0Q8	1798 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CTAGE9	A4FU28	777 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	TMEM232	C9JQI7	657 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	UBE2Q2L	H0YL09	131 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	ORC4	O43929	436 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	STX10	O60499	249 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	KRT38	O76015	456 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	FAM107A	O95990	144 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CALM1	P0DP23	149 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CALM2	P0DP24	149 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	CALM3	P0DP25	149 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	TOP1	P11387	765 aa	Known RBP	10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	MECOM	Q03112	1051 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	PPP1R7	Q15435	360 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	NCAPH2	Q6IBW4	605 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	SLC51A	Q86UW1	340 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	STK11IP	Q8N1F8	1099 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	NSUN4	Q96CB9	384 aa	Known RBP	10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	GPCPD1	Q9NPB8	672 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	LNPEP	Q9UIQ6	1025 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	KCNH3	Q9ULD8	1083 aa		10.78	□□□□□ -0.68
NEK6-215	ENST00000546191	MINDY4B	A8MYZ0	360 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	PPP1R37	O75864	691 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	UBASH3A	P57075	661 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	FUT2	Q10981	343 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	MTF1	Q14872	753 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	LACTB2	Q53H82	288 aa	Predicted RBP	10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	VSTM4	Q8IW00	320 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	ENAH	Q8N8S7	591 aa	Predicted RBP	10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	CYFIP2	Q96F07	1278 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	SETDB2	Q96T68	719 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	NDN	Q99608	321 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	RABL2B	Q9UNT1	228 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	ATP8A1	Q9Y2Q0	1164 aa		10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.77	□□□□□ -0.68
NEK6-215	ENST00000546191	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	PRPF3	O43395	683 aa	Known RBP	10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	KIF5C	O60282	957 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	CEP104	O60308	925 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	DDAH1	O94760	285 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	MMP10	P09238	476 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	MCM3	P25205	808 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	RIPK1	Q13546	671 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	POSTN	Q15063	836 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	SYT15	Q9BQS2	421 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	FBXO2	Q9UK22	296 aa	Predicted RBP	10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	CEP131	Q9UPN4	1083 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	FRMD4B	Q9Y2L6	1034 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	KIAA1551	Q9HCM1	1747 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	MYH13	Q9UKX3	1938 aa		10.77	□□□□□ -0.69
NEK6-215	ENST00000546191	PALM3	A6NDB9	673 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	WTIP	A6NIX2	430 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191		E7EVH7	732 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	EIF3F	O00303	357 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	PENK	P01210	267 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	FAM200B	P0CF97	657 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TM4SF1	P30408	202 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	HIBADH	P31937	336 aa	Known RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	KIF5B	P33176	963 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	STAT6	P42226	847 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TRPC1	P48995	793 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	DYNLL1	P63167	89 aa	Known RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	KIAA0753	Q2KHM9	967 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	SLC4A8	Q2Y0W8	1093 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	SBK1	Q52WX2	424 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	KCTD16	Q68DU8	428 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TPTE2	Q6XPS3	522 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	MAEA	Q7L5Y9	396 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	CATIP	Q7Z7H3	387 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	METTL16	Q86W50	562 aa	Known RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	SLC15A3	Q8IY34	581 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TEX9	Q8N6V9	391 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TRIM11	Q96F44	468 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	TRPV5	Q9NQA5	729 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	ATP8A2	Q9NTI2	1148 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	PANK4	Q9NVE7	773 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	UBAP1	Q9NZ09	502 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	IRS2	Q9Y4H2	1338 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	LAMB1	P07942	1786 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	MYH6	P13533	1939 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	MYH2	Q9UKX2	1941 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	POLRMT	O00411	1230 aa	Known RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	EPB41	P11171	864 aa	Known RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	PSMC4	P43686	418 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	MDM2	Q00987	491 aa	Predicted RBP	10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	CFAP100	Q494V2	611 aa		10.76	□□□□□ -0.69
NEK6-215	ENST00000546191	SMUG1	Q53HV7	270 aa		10.76	□□□□□ -0.69

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