RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	CD4	P01730	458 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	MYL3	P08590	195 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	XBP1	P17861	261 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	FAAP100	Q0VG06	881 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	CCDC83	Q8IWF9	413 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	SPATA33	Q96N06	139 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	ALG1	Q9BT22	464 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	PRO3102	Q9H379	93 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	MLXIP	Q9HAP2	919 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	GJB4	Q9NTQ9	266 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	KCNJ14	Q9UNX9	436 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	NFASC	O94856	1347 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	LOXHD1	Q8IVV2	1947 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	HAS3	O00219	553 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	AR	P10275	920 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	USP11	P51784	963 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	PSMC6	P62333	389 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	NFRKB	Q6P4R8	1299 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	CYFIP1	Q7L576	1253 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	SESTD1	Q86VW0	696 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	VTI1A	Q96AJ9	217 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	GPR20	Q99678	358 aa		18.23	■□□□□ 0.51
HMBS-222	ENST00000545621	KIAA0355	O15063	1070 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	PQBP1	O60828	265 aa	Known RBP	18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	CLTB	P09497	229 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	MCM2	P49736	904 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	PTPN11	Q06124	597 aa	Predicted RBP	18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	LENG9	Q96B70	501 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	C16orf70	Q9BSU1	422 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	AGO4	Q9HCK5	861 aa	Known RBP	18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	TBX21	Q9UL17	535 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	TET1	Q8NFU7	2136 aa		18.22	■□□□□ 0.51
HMBS-222	ENST00000545621	TRIM43B	A6NCK2	446 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	DCDC2C	A8MYV0	355 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	HMGN5	P82970	282 aa	Known RBP	18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	SET	Q01105	290 aa	Predicted RBP	18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	NBPF20	Q3BBV1	942 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	MOXD1	Q6UVY6	613 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	KRT25	Q7Z3Z0	450 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	SH3RF1	Q7Z6J0	888 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	TBCK	Q8TEA7	893 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	TNFRSF25	Q93038	417 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	TMX3	Q96JJ7	454 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	GDF15	Q99988	308 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	TELO2	Q9Y4R8	837 aa		18.21	■□□□□ 0.51
HMBS-222	ENST00000545621	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	SORBS3	O60504	671 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	MMP1	P03956	469 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	SYN1	P17600	705 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	CYP3A7	P24462	503 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	ZNF76	P36508	570 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	ITGB3BP	Q13352	177 aa	Predicted RBP	18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	PLA2G4D	Q86XP0	818 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	OXER1	Q8TDS5	423 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	MBOAT7	Q96N66	472 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	KATNAL1	Q9BW62	490 aa		18.2	■□□□□ 0.5
HMBS-222	ENST00000545621	SI	P14410	1827 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	NOP56	O00567	594 aa	Known RBP	18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	DHX15	O43143	795 aa	Known RBP	18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	B4GALT4	O60513	344 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	LGALS2	P05162	132 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	ZNF286B	P0CG31	522 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	BMP8B	P34820	402 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	PSEN2	P49810	448 aa		18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	NONO	Q15233	471 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
HMBS-222	ENST00000545621	LAMA3	Q16787	3333 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	LAMA2	P24043	3122 aa	Known RBP	18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	GSTTP1	A0A1W2PQM5	241 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	TLR3	O15455	904 aa	Known RBP	18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	ITGB8	P26012	769 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	HOXC8	P31273	242 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	MAGEA10	P43363	369 aa	Predicted RBP	18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	KRT40	Q6A162	431 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	SEPT1	Q8WYJ6	367 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	SDF4	Q9BRK5	362 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	JPH1	Q9HDC5	661 aa	Predicted RBP	18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	TMEM39A	Q9NV64	488 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	SLC9A2	Q9UBY0	812 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621	PRKAG2	Q9UGJ0	569 aa		18.18	■□□□□ 0.5
HMBS-222	ENST00000545621		H3BRB1	525 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	IPO5	O00410	1097 aa	Known RBP	18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	LGR5	O75473	907 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	ATG7	O95352	703 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	KRT2	P35908	639 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	TCF7	P36402	384 aa	Predicted RBP	18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	MFSD10	Q14728	455 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	KIAA0753	Q2KHM9	967 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621		Q4G0T1	1027 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	PRR16	Q569H4	304 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	CTAGE1	Q96RT6	745 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	TRPV6	Q9H1D0	765 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	TUT1	Q9H6E5	874 aa	Known RBP	18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	PKD2L1	Q9P0L9	805 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	GTF2IRD1	Q9UHL9	959 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	EMSY	Q7Z589	1322 aa		18.17	■□□□□ 0.5
HMBS-222	ENST00000545621	CCDC194	A0A1B0GVG4	234 aa		18.16	■□□□□ 0.5
HMBS-222	ENST00000545621	TIMP1	P01033	207 aa		18.16	■□□□□ 0.5
HMBS-222	ENST00000545621	SUPT20HL2	P0C7V6	817 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms