RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
COPA-207ENST00000545284 CCDC96Q2M329 555 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 CHST3Q7LGC8 479 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 FRMD5Q7Z6J6 570 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 KBTBD3Q8NAB2 608 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 RASGRP4Q8TDF6 673 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 ATP8B4Q8TF62 1192 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 BORCS6Q96GS4 357 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 NEK1Q96PY6 1258 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 USP26Q9BXU7 913 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 IL17RBQ9NRM6 502 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
COPA-207ENST00000545284 MED19A0JLT2 244 aaPredicted RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 H3BRB1 525 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 ENPP3O14638 875 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 RNF113AO15541 343 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 GLP2RO95838 553 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 CHGBP05060 677 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 ITGB1P05556 798 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 TOP1P11387 765 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 SDHBP21912 280 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 NRIP1P48552 1158 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 PPARAQ07869 468 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 HIC1Q14526 733 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 CELF3Q5SZQ8 465 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 CMTR2Q8IYT2 770 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 SAMD3Q8N6K7 520 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 TMEM105Q8N8V8 129 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 KREMEN2Q8NCW0 462 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 RMDN1Q96DB5 314 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 TTC14Q96N46 770 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 RMDN3Q96TC7 470 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 C16orf70Q9BSU1 422 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 NAPBQ9H115 298 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 RNPEPQ9H4A4 650 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 TUT1Q9H6E5 874 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 TLE6Q9H808 572 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 EHMT1Q9H9B1 1298 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 TCP11L1Q9NUJ3 509 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 DLL3Q9NYJ7 618 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 MAP3K20Q9NYL2 800 aaKnown RBP8.55□□□□□ -1.04
COPA-207ENST00000545284 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
COPA-207ENST00000545284 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 KRT37O76014 449 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 LMNAP02545 664 aaKnown RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 FGRP09769 529 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 ZNF286BP0CG31 522 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 SLC16A2P36021 539 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 GPATCH4Q5T3I0 446 aaKnown RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 TTBK2Q6IQ55 1244 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 TAF2Q6P1X5 1199 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 SYTL5Q8TDW5 730 aaPredicted RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 POF1BQ8WVV4 589 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 NECTIN4Q96NY8 510 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 RTP3Q9BQQ7 232 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 FTHL17Q9BXU8 183 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 S1PR5Q9H228 398 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 RNF216Q9NWF9 866 aaPredicted RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 ANAPC4Q9UJX5 808 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 BARX2Q9UMQ3 279 aaPredicted RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
COPA-207ENST00000545284 PCDHGC5Q9Y5F6 944 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 GVINP1Q7Z2Y8 2422 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 MICAL3Q7RTP6 2002 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
COPA-207ENST00000545284 ABCB11O95342 1321 aa8.54□□□□□ -1.04
COPA-207ENST00000545284 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
COPA-207ENST00000545284 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 TREHO43280 583 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ORC4O43929 436 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 PDGFBP01127 241 aaPredicted RBP8.53□□□□□ -1.04
COPA-207ENST00000545284 NR3C2P08235 984 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 STAG3L1P0CL83 205 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 SMIM10L2AP0DMW4 78 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 SMIM10L2BP0DMW5 78 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 SNHG28P0DPA3 235 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
COPA-207ENST00000545284 ADAM17P78536 824 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ITIH3Q06033 890 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ZNF543Q08ER8 600 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 KCNC3Q14003 757 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 DUSP6Q16828 381 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 HSDL1Q3SXM5 330 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ARHGEF16Q5VV41 709 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ADGRD2Q7Z7M1 963 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 TAAR1Q96RJ0 339 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 MFSD1Q9H3U5 465 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
COPA-207ENST00000545284 PLXNA3P51805 1871 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 NRCAMQ92823 1304 aa8.53□□□□□ -1.04
COPA-207ENST00000545284 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms