RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 SLC5A5Q92911 643 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 LENG1Q96BZ8 264 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 HMX1Q9NP08 348 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 DDX25Q9UHL0 483 aaKnown RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 FAM184BQ9ULE4 1060 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 Q9Y3F1 56 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 NFASCO94856 1347 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 TBX3O15119 743 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 ADAMTS4O75173 837 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 DUSP11O75319 330 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 PSMD10O75832 226 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 BMP8BP34820 402 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 ZNF76P36508 570 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 SETQ01105 290 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 TNFAIP2Q03169 654 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 PTPAQ15257 358 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 GJA10Q969M2 543 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 NAP1L4Q99733 375 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 DDX20Q9UHI6 824 aaKnown RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
SRRM4-203ENST00000545224 MORC2Q9Y6X9 1032 aaPredicted RBP12.88□□□□□ -0.35
SRRM4-203ENST00000545224 NKRFO15226 690 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRRM4-203ENST00000545224 HOXD8P13378 290 aaPredicted RBP12.87□□□□□ -0.35
SRRM4-203ENST00000545224 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 MCM7P33993 719 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 GJA9P57773 515 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 NUCB2P80303 420 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 SPIRE1Q08AE8 756 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 IL17AQ16552 155 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
SRRM4-203ENST00000545224 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 CHAMP1Q96JM3 812 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
SRRM4-203ENST00000545224 CLIC4Q9Y696 253 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
SRRM4-203ENST00000545224 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 IPO5O00410 1097 aaKnown RBP12.86□□□□□ -0.35
SRRM4-203ENST00000545224 ATG7O95352 703 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 GGPS1O95749 300 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 CCNE2O96020 404 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
SRRM4-203ENST00000545224 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
SRRM4-203ENST00000545224 PTGDRQ13258 359 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 NEDD9Q14511 834 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
SRRM4-203ENST00000545224 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 METTL7BQ6UX53 244 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 NECAB2Q7Z6G3 386 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 UIMC1Q96RL1 719 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 RIT2Q99578 217 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 ZNF577Q9BSK1 485 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 OGDHLQ9ULD0 1010 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
SRRM4-203ENST00000545224 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 A6NJR5 290 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 NEMFO60524 1076 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 MSCO60682 206 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 GH1P01241 217 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 CST5P28325 142 aaPredicted RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 CNGA1P29973 690 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
SRRM4-203ENST00000545224 TFIP11Q9UBB9 837 aaKnown RBP12.85□□□□□ -0.35
SRRM4-203ENST00000545224 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 EML1O00423 815 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 PGK1P00558 417 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 RARBP10826 455 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 PRPHP41219 470 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
SRRM4-203ENST00000545224 SLC39A14Q15043 492 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms