RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SLC27A3Q5K4L6 730 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SP8Q8IXZ3 490 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SEPT12Q8IYM1 358 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 EXOC4Q96A65 974 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 RAB17Q9H0T7 212 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS50-220ENST00000544910 SRGAP2O75044 1071 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 STAT2P52630 851 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 CYP27A1Q02318 531 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 CPLX4Q7Z7G2 160 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 MCF2L2Q86YR7 1114 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 FAM178BQ8IXR5 827 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
VPS50-220ENST00000544910 MASTLQ96GX5 879 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 KRT12Q99456 494 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 ZMYND12Q9H0C1 365 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 EPC1Q9H2F5 836 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 PLEKHA4Q9H4M7 779 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SAMD15Q9P1V8 674 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 A0A1W2PQJ5 194 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SLC26A4O43511 780 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 EEF2P13639 858 aaKnown RBP6.33□□□□□ -1.4
VPS50-220ENST00000544910 ZNF18P17022 549 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS50-220ENST00000544910 SNAP25P60880 206 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 TMEM179Q6ZVK1 233 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 GSTA5Q7RTV2 222 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 HOOK3Q86VS8 718 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 ANKRD13CQ8N6S4 541 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 CSRNP1Q96S65 589 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 ZNF577Q9BSK1 485 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 IMPG2Q9BZV3 1241 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS50-220ENST00000544910 RGL2O15211 777 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ZMYND10O75800 440 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ATP1A1P05023 1023 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 AKR1B1P15121 316 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 EHHADHQ08426 723 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CALCOCO2Q13137 446 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PDIA5Q14554 519 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 C3orf67Q6ZVT6 689 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GUF1Q8N442 669 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 PPFIBP2Q8ND30 876 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CAPS2Q9BXY5 557 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 DNAI2Q9GZS0 605 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GCNT4Q9P109 453 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ATP6V0A2Q9Y487 856 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 E9PMD0 336 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GJC1P36383 396 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GNGT1P63211 74 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ATP11AP98196 1134 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GFPT1Q06210 699 aaPredicted RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 TBX2Q13207 712 aaPredicted RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 FAM102BQ5T8I3 360 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PRR5LQ6MZQ0 368 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PBKQ96KB5 322 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CFAP57Q96MR6 1250 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 IWS1Q96ST2 819 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 QTRT2Q9H974 415 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 DAGLAQ9Y4D2 1042 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 NID2Q14112 1375 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 MARF1Q9Y4F3 1742 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 TARSL2A2RTX5 802 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 SMIM23A6NLE4 172 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ATP2C2O75185 946 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GUCY2DQ02846 1103 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 STRN3Q13033 797 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 LIN9Q5TKA1 542 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PDXDC1Q6P996 788 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 KRT27Q7Z3Y8 459 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 NIM1KQ8IY84 436 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 FAM186BQ8IYM0 893 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 RUBCNQ92622 972 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 FNBP1Q96RU3 617 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CRAMP1Q96RY5 1269 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 TMEM60Q9H2L4 133 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 MLXIPQ9HAP2 919 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 HOMER2Q9NSB8 354 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 MTMR4Q9NYA4 1195 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 STIM2Q9P246 746 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 HDAC6Q9UBN7 1215 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 LRP6O75581 1613 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 FTCDO95954 541 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 H2AFZP0C0S5 128 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ATP5DP30049 168 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CXCR5P32302 372 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PPP4CP60510 307 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CDKAL1Q5VV42 579 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 H2AFVQ71UI9 128 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 FOXP4Q8IVH2 680 aaPredicted RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GJA10Q969M2 543 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms