RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 ASTE1Q2TB18 679 aaPredicted RBP11.31□□□□□ -0.6
TCF4-209ENST00000544241 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 TAOK1Q7L7X3 1001 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 IFNL3Q8IZI9 196 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 BICD1Q96G01 975 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
TCF4-209ENST00000544241 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCF4-209ENST00000544241 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 F8VZ95 297 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 SERPING1P05155 500 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 GNAT1P11488 350 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 CHN1P15882 459 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 EHHADHQ08426 723 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 CNNM4Q6P4Q7 775 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 SCFD2Q8WU76 684 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 FAM207AQ9NSI2 230 aaPredicted RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 NUDT17P0C025 328 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 ALDH3A1P30838 453 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 UBA7P41226 1012 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 SLC1A4P43007 532 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 TSNAXIP1Q2TAA8 658 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 ELAC2Q9BQ52 826 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 KBTBD4Q9NVX7 518 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 SALL4Q9UJQ4 1053 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 SIK3Q9Y2K2 1263 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 USP15Q9Y4E8 981 aaPredicted RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 LRRC42Q9Y546 428 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
TCF4-209ENST00000544241 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
TCF4-209ENST00000544241 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 BHMG1C9JSJ3 638 aaPredicted RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-209ENST00000544241 KCNK3O14649 394 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 BACH1O14867 736 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 KIF4AO95239 1232 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 AGTP01019 485 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ADORA1P30542 326 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 PCK1P35558 622 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 NCALDP61601 193 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 PSMD2Q13200 908 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 CUL3Q13618 768 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SCARF1Q14162 830 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SEC14L1Q92503 715 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ANKS1AQ92625 1134 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 FMO2Q99518 471 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-209ENST00000544241 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 MYH10P35580 1976 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 KLRC4O43908 158 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SNX3O60493 162 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ATP5HO75947 161 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 FTCDO95954 541 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 GSTA2P09210 222 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 RARAP10276 462 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 CALML3P27482 149 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 MCM7P33993 719 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SH3BGRP55822 239 aaPredicted RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 KCNJ2P63252 427 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 KLC1Q07866 573 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 BNIP1Q12981 228 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 PDIA5Q14554 519 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 CLUL1Q15846 466 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 LRRC23Q53EV4 343 aaPredicted RBP11.29□□□□□ -0.6
TCF4-209ENST00000544241 SFMBT2Q5VUG0 894 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 ARHGAP22Q7Z5H3 698 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
TCF4-209ENST00000544241 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms