RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 SMTNP53814 917 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 PLS1Q14651 629 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 ARHGAP44Q17R89 818 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 ALKBH5Q6P6C2 394 aaKnown RBP9.37□□□□□ -0.91
ABCB1-210ENST00000543898 PDXDC1Q6P996 788 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 USP17L2Q6R6M4 530 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 DDX12PQ92771 950 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
ABCB1-210ENST00000543898 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
ABCB1-210ENST00000543898 TLR10Q9BXR5 811 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 STMN4Q9H169 189 aaPredicted RBP9.37□□□□□ -0.91
ABCB1-210ENST00000543898 VCPKMTQ9H867 229 aa9.37□□□□□ -0.91
ABCB1-210ENST00000543898 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
ABCB1-210ENST00000543898 KDM6AO15550 1401 aaPredicted RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CAND2O75155 1236 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CPP00450 1065 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 FGGP02679 453 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 HSD17B3P37058 310 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 RCAN1P53805 252 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CALCOCO2Q13137 446 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CCDC6Q16204 474 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 OTUD6AQ7L8S5 288 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CCDC105Q8IYK2 499 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 KLHL29Q96CT2 875 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 AK8Q96MA6 479 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 FMO2Q99518 471 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 SNX24Q9Y343 169 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CUL1Q13616 776 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CDC37Q16543 378 aaPredicted RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 SUSD4Q5VX71 490 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 GPBP1Q86WP2 473 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 VSIG1Q86XK7 387 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 PIGBQ92521 554 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 IFT74Q96LB3 600 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 DUSP9Q99956 384 aaKnown RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 ARMCX3Q9UH62 379 aaPredicted RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 CCDC169A6NNP5 214 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 EPHB6O15197 1021 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 BIRC3Q13489 604 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 PICALMQ13492 652 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 SEC23AQ15436 765 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 LRP10Q7Z4F1 713 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 RPUSD2Q8IZ73 545 aaKnown RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 ZNF507Q8TCN5 953 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 SGSM3Q96HU1 749 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 ERGIC2Q96RQ1 377 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 DONSONQ9NYP3 566 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 PTPN22Q9Y2R2 807 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 DAAM1Q9Y4D1 1078 aa9.36□□□□□ -0.91
ABCB1-210ENST00000543898 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
ABCB1-210ENST00000543898 LDHBP07195 334 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 NR2F2P24468 414 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 IL17AQ16552 155 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 MEA1Q16626 185 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 KLHDC7AQ5VTJ3 777 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PPP4R3AQ6IN85 833 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 RDH13Q8NBN7 331 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 COA7Q96BR5 231 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CELF4Q9BZC1 486 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 MAGEF1Q9HAY2 307 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CTTNBP2NLQ9P2B4 639 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CNTNAP5Q8WYK1 1306 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 LAD1O00515 517 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 TTI1O43156 1089 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SHOX2O60902 331 aaPredicted RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 XRCC5P13010 732 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SKOR1P84550 965 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 EXOC3L4Q17RC7 722 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CCDC38Q502W7 563 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SYCP3Q8IZU3 236 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SYCE1Q8N0S2 351 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 MARCH10Q8NA82 808 aaPredicted RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SPDL1Q96EA4 605 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CHMP6Q96FZ7 201 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PBKQ96KB5 322 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 FAM167BQ9BTA0 163 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PACSIN1Q9BY11 444 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CCSER1Q9C0I3 900 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 ARPP21Q9UBL0 812 aaPredicted RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 DDX20Q9UHI6 824 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PCDHA12Q9UN75 941 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 ZNF263O14978 683 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 VPS41P49754 854 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 LRRC14Q15048 493 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
ABCB1-210ENST00000543898 SLC44A5Q8NCS7 719 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 CAVIN3Q969G5 261 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
ABCB1-210ENST00000543898 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms