RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 GPR20Q99678 358 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 MTIF3Q9H2K0 278 aaKnown RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 CXXC1Q9P0U4 656 aaPredicted RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 TELO2Q9Y4R8 837 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 H3BRB1 525 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 ATP9AO75110 1047 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 PFKMP08237 780 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 KCNA2P16389 499 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 SP4Q02446 784 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 MTMR1Q13613 665 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 PKN1Q16512 942 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 DEFB128Q7Z7B8 93 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 CCDC155Q8N6L0 562 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 CAGE1Q8TC20 777 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 DHX38Q92620 1227 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 UPF3BQ9BZI7 483 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 GLT8D2Q9H1C3 349 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 SEMA6BQ9H3T3 888 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 TUT1Q9H6E5 874 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 TMEM260Q9NX78 707 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 GRXCR1A8MXD5 290 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 RFC2P35250 354 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 CLK2P49760 499 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 HIC1Q14526 733 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 NTRK3Q16288 839 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 PHKBQ93100 1093 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 GUCD1Q96NT3 240 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 TTYH1Q9H313 450 aaPredicted RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 NCOA5Q9HCD5 579 aaKnown RBP16.35■□□□□ 0.21
VPS37B-204ENST00000543590 STXBP5LQ9Y2K9 1186 aa16.35■□□□□ 0.21
VPS37B-204ENST00000543590 SCN5AQ14524 2016 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 MAFGO15525 162 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 DNAJB2P25686 324 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 RBL2Q08999 1139 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 PTK7Q13308 1070 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 AP3B2Q13367 1082 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 TRIM50Q86XT4 487 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 PKD2L1Q9P0L9 805 aa16.34■□□□□ 0.21
VPS37B-204ENST00000543590 TRIP12Q14669 1992 aaPredicted RBP16.33■□□□□ 0.21
VPS37B-204ENST00000543590 TMEM265A0A087WTH1 108 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 ESYT2A0FGR8 921 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 SMIM10L2AP0DMW4 78 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 SMIM10L2BP0DMW5 78 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 CKBP12277 381 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 SELPP16109 830 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 IFNAR1P17181 557 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 SREBF1P36956 1147 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
VPS37B-204ENST00000543590 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
VPS37B-204ENST00000543590 CYP2W1Q8TAV3 490 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
VPS37B-204ENST00000543590 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
VPS37B-204ENST00000543590 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
VPS37B-204ENST00000543590 C17orf102A2RUQ5 167 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 ZBBXA8MT70 800 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 ADAMTS3O15072 1205 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 HOXC8P31273 242 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 PBX2P40425 430 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 JAKMIP3Q5VZ66 844 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 LRRC8DQ7L1W4 858 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 WNT8BQ93098 351 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 TIFAQ96CG3 184 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 PBX4Q9BYU1 374 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 FTOQ9C0B1 505 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 RNPEPQ9H4A4 650 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 KCNH7Q9NS40 1196 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
VPS37B-204ENST00000543590 TANC1Q9C0D5 1861 aa16.32■□□□□ 0.2
VPS37B-204ENST00000543590 GSTTP1A0A1W2PQM5 241 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 ARP10275 920 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 ACTN1P12814 892 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 GPNMBQ14956 572 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 ATP6V0A1Q93050 837 aa16.31■□□□□ 0.2
VPS37B-204ENST00000543590 MEIS1O00470 390 aa16.3■□□□□ 0.2
VPS37B-204ENST00000543590 PARNO95453 639 aaKnown RBP16.3■□□□□ 0.2
VPS37B-204ENST00000543590 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
VPS37B-204ENST00000543590 ZNF618Q5T7W0 954 aa16.3■□□□□ 0.2
VPS37B-204ENST00000543590 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms