RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 CPLX4Q7Z7G2 160 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 MYH7BA7E2Y1 1941 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 STXBP3O00186 592 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 CLGNO14967 610 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 ECHS1P30084 290 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 RAPGEF1Q13905 1077 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 ARHGAP27Q6ZUM4 889 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 ARMC9Q7Z3E5 817 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 ZNF384Q8TF68 577 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 RAPGEF5Q92565 580 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 MIEF2Q96C03 454 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 TMEM59LQ9UK28 342 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 TPX2Q9ULW0 747 aaKnown RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 NOVA2Q9UNW9 492 aaKnown RBP13.77□□□□□ -0.21
SMCR5-201ENST00000543475 A0A087X0T9 212 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 FAM228BP0C875 321 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 TFAP4Q01664 338 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMCR5-201ENST00000543475 E2F5Q15329 346 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 LSM14BQ9BX40 385 aaKnown RBP13.76□□□□□ -0.21
SMCR5-201ENST00000543475 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 NHSL1Q5SYE7 1610 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 CEP104O60308 925 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 LRRC41Q15345 812 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
SMCR5-201ENST00000543475 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
SMCR5-201ENST00000543475 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
SMCR5-201ENST00000543475 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
SMCR5-201ENST00000543475 COL5A2P05997 1499 aaPredicted RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 NOL4O94818 638 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 GCFC2P16383 781 aaKnown RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 SLC8A1P32418 973 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 TXKP42681 527 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 GRM4Q14833 912 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 AGBL2Q5U5Z8 902 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 KRT25Q7Z3Z0 450 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 MAGEC3Q8TD91 643 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 SLIT2O94813 1529 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 CYTH3O43739 400 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 NAPAP54920 295 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 MAGOHP61326 146 aaKnown RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 DGKHQ86XP1 1220 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 LARP4BQ92615 738 aaKnown RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 TATDN2Q93075 761 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 MAGOHBQ96A72 148 aaKnown RBP13.75□□□□□ -0.21
SMCR5-201ENST00000543475 HVCN1Q96D96 273 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
SMCR5-201ENST00000543475 PHF20L1A8MW92 1017 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 TRAF5O00463 557 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 CES2O00748 559 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
SMCR5-201ENST00000543475 KIF4AO95239 1232 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
SMCR5-201ENST00000543475 GRB10Q13322 594 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 LACTB2Q53H82 288 aaPredicted RBP13.74□□□□□ -0.21
SMCR5-201ENST00000543475 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 P3H4Q92791 437 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 PBKQ96KB5 322 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 STK17AQ9UEE5 414 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 LAMB1P07942 1786 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 PAEPP09466 180 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 EVA1CP58658 441 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 XRCC4Q13426 336 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 SLC35G1Q2M3R5 365 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
SMCR5-201ENST00000543475 IL17RBQ9NRM6 502 aa13.74□□□□□ -0.21
SMCR5-201ENST00000543475 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms