RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 TCP11L1Q9NUJ3 509 aa15.7■□□□□ 0.1
PRAME-214ENST00000543184 SIK3Q9Y2K2 1263 aa15.7■□□□□ 0.1
PRAME-214ENST00000543184 HYOU1Q9Y4L1 999 aa15.7■□□□□ 0.1
PRAME-214ENST00000543184 MYMKA6NI61 221 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 HEXIM1O94992 359 aaKnown RBP15.69■□□□□ 0.1
PRAME-214ENST00000543184 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
PRAME-214ENST00000543184 MMS22LQ6ZRQ5 1243 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 PYM1Q9BRP8 204 aaKnown RBP15.69■□□□□ 0.1
PRAME-214ENST00000543184 QSER1Q2KHR3 1735 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 STXBP3O00186 592 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 ECE2O60344 883 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 PALMO75781 387 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 FGRP09769 529 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 MFSD14BQ5SR56 506 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 CACNA2D4Q7Z3S7 1137 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 DDX42Q86XP3 938 aaKnown RBP eCLIP15.69■□□□□ 0.1
PRAME-214ENST00000543184 UBA5Q9GZZ9 404 aa15.69■□□□□ 0.1
PRAME-214ENST00000543184 IRS2Q9Y4H2 1338 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 POTEMA6NI47 508 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 KIF5BP33176 963 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 PAFAH1B1P43034 410 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 EPHB4P54760 987 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 NAPAP54920 295 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 EHHADHQ08426 723 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 RNF187Q5TA31 235 aaPredicted RBP15.68■□□□□ 0.1
PRAME-214ENST00000543184 IQCEQ6IPM2 695 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 ERGIC2Q96RQ1 377 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.68■□□□□ 0.1
PRAME-214ENST00000543184 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
PRAME-214ENST00000543184 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 YDJCA8MPS7 323 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 GOLGA8KD6RF30 607 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 GPR162Q16538 588 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 DHX37Q8IY37 1157 aaKnown RBP15.68■□□□□ 0.1
PRAME-214ENST00000543184 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 MKNK2Q9HBH9 465 aa15.68■□□□□ 0.1
PRAME-214ENST00000543184 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 CFAP58Q5T655 872 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 CASKIN2Q8WXE0 1202 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 H0YHG0 523 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 OPA1O60313 960 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 KLRC1P26715 233 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 KCNMA1Q12791 1236 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
PRAME-214ENST00000543184 PIK3R5Q8WYR1 880 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 BAP1Q92560 729 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 TSGA10Q9BZW7 698 aa15.67■□□□□ 0.1
PRAME-214ENST00000543184 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
PRAME-214ENST00000543184 SMCO2A6NFE2 343 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 ORC4O43929 436 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 CPP00450 1065 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 SSBP05455 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRAME-214ENST00000543184 HDLBPQ00341 1268 aaKnown RBP15.66■□□□□ 0.1
PRAME-214ENST00000543184 ZNF662Q6ZS27 426 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 MAATS1Q7Z4T9 603 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 CERS5Q8N5B7 392 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 RETREG2Q8NC44 543 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 TLR2O60603 784 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 ATP2C2O75185 946 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 TSPY3P0CV98 308 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 TSPY8P0CW00 308 aa15.66■□□□□ 0.1
PRAME-214ENST00000543184 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
PRAME-214ENST00000543184 SH3RF3Q8TEJ3 882 aaPredicted RBP15.66■□□□□ 0.1
PRAME-214ENST00000543184 BCCIPQ9P287 314 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRAME-214ENST00000543184 KLRF2D3W0D1 207 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 TCP1P17987 556 aaKnown RBP15.65■□□□□ 0.1
PRAME-214ENST00000543184 LSP1P33241 339 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 POLR2FP61218 127 aaKnown RBP15.65■□□□□ 0.1
PRAME-214ENST00000543184 GRB10Q13322 594 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 TBC1D5Q92609 795 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 LRRC4CQ9HCJ2 640 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 CD248Q9HCU0 757 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 BLOC1S4Q9NUP1 217 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 HGSNATQ68CP4 663 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 MCTP2Q6DN12 878 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 NOC3LQ8WTT2 800 aaKnown RBP15.65■□□□□ 0.1
PRAME-214ENST00000543184 TMEM47Q9BQJ4 181 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 BARHL2Q9NY43 387 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
PRAME-214ENST00000543184 SLC37A4O43826 429 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 TDP2O95551 362 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 IFT88Q13099 833 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 HLTFQ14527 1009 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■■■■□ 23.8
PRAME-214ENST00000543184 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 MAPKAPK5Q8IW41 473 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 TGFBRAP1Q8WUH2 860 aa15.64■□□□□ 0.09
PRAME-214ENST00000543184 CCDC47Q96A33 483 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms