RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ERCC3P19447 782 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 TNNI2P48788 182 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 ATP2B2Q01814 1243 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 LRRC41Q15345 812 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 MFSD14BQ5SR56 506 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 PPP1R18Q6NYC8 613 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 C10orf67Q8IYJ2 551 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
KDM2B-216ENST00000543025 GLIS3Q8NEA6 775 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 GAKO14976 1311 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 SNHG28P0DPA3 235 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 CXCR5P32302 372 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 KCNMA1Q12791 1236 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 COASYQ13057 564 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 ZCWPW2Q504Y3 356 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
KDM2B-216ENST00000543025 HGSNATQ68CP4 663 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
KDM2B-216ENST00000543025 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
KDM2B-216ENST00000543025 TTLL6Q8N841 843 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 PSMB7Q99436 277 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 CEP72Q9P209 647 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 SALL4Q9UJQ4 1053 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
KDM2B-216ENST00000543025 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 MATR3P43243 847 aaKnown RBP eCLIP18.31■□□□□ 0.52
KDM2B-216ENST00000543025 EPHB4P54760 987 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 RASSF7Q02833 373 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 STIM2Q9P246 746 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GOLGA6CA6NDK9 693 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 TRIM66O15016 1216 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GOLGA6DP0CG33 693 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GPIHBP1Q8IV16 184 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
KDM2B-216ENST00000543025 DNAJC19Q96DA6 116 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 HINFPQ9BQA5 517 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GOLGA6AQ9NYA3 693 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 DDX25Q9UHL0 483 aaKnown RBP18.31■□□□□ 0.52
KDM2B-216ENST00000543025 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
KDM2B-216ENST00000543025 PPFIA4O75335 1185 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 SLC1A4P43007 532 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 ECM1Q16610 540 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 KLHDC7AQ5VTJ3 777 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 TBC1D22AQ8WUA7 517 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 TLR10Q9BXR5 811 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 PNMA6FA0A0J9YX94 578 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 TRAF5O00463 557 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 NCK2O43639 380 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
KDM2B-216ENST00000543025 FAM26FQ5R3K3 315 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 C8orf74Q6P047 294 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 EMBQ6PCB8 327 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 NLRC4Q9NPP4 1024 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
KDM2B-216ENST00000543025 BMP2KQ9NSY1 1161 aaPredicted RBP18.3■□□□□ 0.52
KDM2B-216ENST00000543025 PANK4Q9NVE7 773 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 RSPH14Q9UHP6 348 aa18.3■□□□□ 0.52
KDM2B-216ENST00000543025 BUB1O43683 1085 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 SHOX2O60902 331 aaPredicted RBP18.29■□□□□ 0.52
KDM2B-216ENST00000543025 SERPING1P05155 500 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 TNFRSF8P28908 595 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
KDM2B-216ENST00000543025 SLC7A5Q01650 507 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 UBE2SQ16763 222 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 HAS1Q92839 578 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 CEP63Q96MT8 703 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 GPCPD1Q9NPB8 672 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 RNF14Q9UBS8 474 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 MYH10P35580 1976 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 GNA14O95837 355 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
KDM2B-216ENST00000543025 CFAP221Q4G0U5 840 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 GLE1Q53GS7 698 aaKnown RBP18.29■□□□□ 0.52
KDM2B-216ENST00000543025 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 TBC1D16Q8TBP0 767 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 CUL5Q93034 780 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
KDM2B-216ENST00000543025 JMJD4Q9H9V9 463 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 SMARCAL1Q9NZC9 954 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 EHD2Q9NZN4 543 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 POLLQ9UGP5 575 aa18.29■□□□□ 0.52
KDM2B-216ENST00000543025 GOLGA8KD6RF30 607 aa18.28■□□□□ 0.52
KDM2B-216ENST00000543025 MARCH6O60337 910 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms