RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 DNAJC7Q99615 494 aa15.77■□□□□ 0.11
LDB3-207ENST00000542786 SLF1Q9BQI6 1058 aa15.77■□□□□ 0.11
LDB3-207ENST00000542786 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.11
LDB3-207ENST00000542786 PARP14Q460N5 1801 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 TTC26A0AVF1 554 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 PPP2R5CQ13362 524 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 MYOCDQ8IZQ8 938 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 FEZ1Q99689 392 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 HSD17B14Q9BPX1 270 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
LDB3-207ENST00000542786 CAPN11Q9UMQ6 739 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 GOLGB1Q14789 3259 aaKnown RBP15.76■□□□□ 0.11
LDB3-207ENST00000542786 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 MEIS1O00470 390 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 DGKZQ13574 1117 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 GIT2Q14161 759 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 SYCP1Q15431 976 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 NBPF12Q5TAG4 269 aaPredicted RBP15.76■□□□□ 0.11
LDB3-207ENST00000542786 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 TMTC1Q8IUR5 882 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 CCDC65Q8IXS2 484 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 KCTD17Q8N5Z5 321 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
LDB3-207ENST00000542786 EIF2AK1Q9BQI3 630 aaKnown RBP15.76■□□□□ 0.11
LDB3-207ENST00000542786 FRMPD4Q14CM0 1322 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
LDB3-207ENST00000542786 KRT9P35527 623 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 ZNF76P36508 570 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
LDB3-207ENST00000542786 SCFD1Q8WVM8 642 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 ANKRD7Q92527 254 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 KCTD10Q9H3F6 313 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 SLC38A10Q9HBR0 1119 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
LDB3-207ENST00000542786 EMILIN3Q9NT22 766 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
LDB3-207ENST00000542786 A0A0U1RQJ8 604 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 NFIBO00712 420 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 TPM1P09493 284 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 KLK7P49862 253 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 UBXN2AP68543 259 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
LDB3-207ENST00000542786 FIGNQ5HY92 759 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 EPM2AIP1Q7L775 607 aaPredicted RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 GJA3Q9Y6H8 435 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 SSC5DA1L4H1 1573 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 RLFQ13129 1914 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 EYA4O95677 639 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 CCDC175P0C221 793 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 VCAM1P19320 739 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 MEA1Q16626 185 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 RETREG2Q8NC44 543 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 WDR24Q96S15 920 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 REEP2Q9BRK0 252 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 NOC4LQ9BVI4 516 aaKnown RBP15.74■□□□□ 0.11
LDB3-207ENST00000542786 EHMT1Q9H9B1 1298 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 TUFT1Q9NNX1 390 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 RGL1Q9NZL6 768 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 DNM3Q9UQ16 869 aa15.74■□□□□ 0.11
LDB3-207ENST00000542786 PHIPQ8WWQ0 1821 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 ARP10275 920 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 HOXD13P35453 343 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 RBM10P98175 930 aaKnown RBP15.73■□□□□ 0.11
LDB3-207ENST00000542786 TBC1D8BQ0IIM8 1120 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 MAN2A1Q16706 1144 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 VWA3BQ502W6 1294 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 LRCH2Q5VUJ6 765 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 OR8K1Q8NGG5 319 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 IL31RAQ8NI17 732 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
LDB3-207ENST00000542786 RUSC1Q9BVN2 902 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 ZNF215Q9UL58 517 aaPredicted RBP15.73■□□□□ 0.11
LDB3-207ENST00000542786 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
LDB3-207ENST00000542786 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 SLITRK3O94933 977 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 FGFR1OPO95684 399 aaKnown RBP15.72■□□□□ 0.11
LDB3-207ENST00000542786 ITGB5P18084 799 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 CASP5P51878 434 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 CYP4A11Q02928 519 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 MTMR2Q13614 643 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 TRPM4Q8TD43 1214 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 CHP1Q99653 195 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 TSG101Q99816 390 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 TBC1D7Q9P0N9 293 aa15.72■□□□□ 0.11
LDB3-207ENST00000542786 REXO2Q9Y3B8 237 aaKnown RBP15.72■□□□□ 0.11
LDB3-207ENST00000542786 BCRP11274 1271 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms