RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 IBSPP21815 317 aaPredicted RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 SHMT1P34896 483 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 CALD1Q05682 793 aaKnown RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 SRSF1Q07955 248 aaKnown RBP eCLIP3.97□□□□□ -1.77
CHD4-209ENST00000542717 TROAPQ12815 778 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PTK7Q13308 1070 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PPP2R5BQ15173 497 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 SF3A2Q15428 464 aaKnown RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 PTPN14Q15678 1187 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 FAM83BQ5T0W9 1011 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 GORABQ5T7V8 394 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 RNF43Q68DV7 783 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 CCDC149Q6ZUS6 474 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 TMEM179Q6ZVK1 233 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 CLEC10AQ8IUN9 316 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 REPS2Q8NFH8 660 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PJA1Q8NG27 643 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 GPR152Q8TDT2 470 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 ZNF384Q8TF68 577 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 AFG1LQ8WV93 481 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 SHDQ96IW2 340 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 EHD4Q9H223 541 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 ACAD9Q9H845 621 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 GOPCQ9HD26 462 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 ENTPD7Q9NQZ7 604 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 IFT57Q9NWB7 429 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 IGSF9Q9P2J2 1179 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 HDAC6Q9UBN7 1215 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 GTF2IRD1Q9UHL9 959 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 ISY1Q9ULR0 285 aaKnown RBP3.97□□□□□ -1.77
CHD4-209ENST00000542717 TMX2Q9Y320 296 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PCDHB12Q9Y5F1 795 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PTPN13Q12923 2485 aa3.97□□□□□ -1.77
CHD4-209ENST00000542717 PDS5AQ29RF7 1337 aaKnown RBP3.96□□□□□ -1.77
CHD4-209ENST00000542717 SPTA1P02549 2419 aa3.96□□□□□ -1.77
CHD4-209ENST00000542717 PYCARD-AS1I3L0S3 204 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 TM4SF5O14894 197 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 NKRFO15226 690 aaKnown RBP eCLIP3.96□□□□□ -1.78
CHD4-209ENST00000542717 TREHO43280 583 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 HYAL3O43820 417 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 ALDH1L1O75891 902 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 NBPF7P0C2Y1 421 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 SRFP11831 508 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 GBP2P32456 591 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 NRLP54845 237 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 ERVFC1P60507 584 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 PPP4CP60510 307 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 UBE3AQ05086 875 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 APOBRQ0VD83 1088 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 PPP2R5DQ14738 602 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 SH3PXD2AQ5TCZ1 1133 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 PDE12Q6L8Q7 609 aaKnown RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 KIAA1841Q6NSI8 718 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 TRAF7Q6Q0C0 670 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 CHST3Q7LGC8 479 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 SESTD1Q86VW0 696 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 THNSL1Q8IYQ7 743 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 C12orf76Q8N812 135 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 RSAD2Q8WXG1 361 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 APBB2Q92870 758 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 COPS5Q92905 334 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 WNT8BQ93098 351 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 KIFC2Q96AC6 838 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 PURBQ96QR8 312 aaKnown RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 CTAGE1Q96RT6 745 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 UBL7Q96S82 380 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 FAM126AQ9BYI3 521 aaPredicted RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 SRCIN1Q9C0H9 1055 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 BCAS3Q9H6U6 928 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 AAASQ9NRG9 546 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 TMEM260Q9NX78 707 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 PUF60Q9UHX1 559 aaKnown RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 NEUROG3Q9Y4Z2 214 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 NBEAQ8NFP9 2946 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 DOPEY1Q5JWR5 2465 aa3.96□□□□□ -1.78
CHD4-209ENST00000542717 DSPP15924 2871 aaKnown RBP3.96□□□□□ -1.78
CHD4-209ENST00000542717 FRMPD2Q68DX3 1309 aaPredicted RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 KANSL1LA0AUZ9 987 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 A6NJR5 290 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 FAM170BA6NMN3 283 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TK2O00142 265 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 CAPN9O14815 690 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 NCAM2O15394 837 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 C1QL1O75973 258 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 FGF18O76093 207 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 ZNF853P0CG23 659 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TXNP10599 105 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 CASTP20810 708 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 RDXP35241 583 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 MAGEA9P43362 315 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 PSEN2P49810 448 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 TIMM10P62072 90 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 DYNLL1P63167 89 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 MVPQ14764 893 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 TRIM71Q2Q1W2 868 aaKnown RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 TWISTNBQ3B726 338 aaPredicted RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 RABL6Q3YEC7 729 aaPredicted RBP3.95□□□□□ -1.78
CHD4-209ENST00000542717 DAB2IPQ5VWQ8 1189 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 KANK3Q6NY19 840 aa3.95□□□□□ -1.78
CHD4-209ENST00000542717 PI16Q6UXB8 463 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms