RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 GDPD2Q9HCC8 539 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 STRNO43815 780 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 GPR37L1O60883 481 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CUTAO60888 179 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 BMP1P13497 986 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MAPK4P31152 587 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MCM7P33993 719 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ME1P48163 572 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PTGDRQ13258 359 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 KCTD2Q14681 263 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ZNF174Q15697 407 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PXMP2Q9NR77 195 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 DDX25Q9UHL0 483 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 OR52Z1P0C646 297 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FCER1AP12319 257 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ATP2B1P20020 1258 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NBR1Q14596 966 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 Q3C1V9 767 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SLFN12Q8IYM2 578 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 C4orf32Q8N8J7 132 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MMP19Q99542 508 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PDCD2LQ9BRP1 358 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FBXO2Q9UK22 296 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ZNFX1Q9P2E3 1918 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 WNT7AO00755 349 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 EDIL3O43854 480 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CCND2P30279 289 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ZNF76P36508 570 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PGM5Q15124 567 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CALCRLQ16602 461 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 KLHL40Q2TBA0 621 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ARHGEF16Q5VV41 709 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TRIB2Q92519 343 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 AK8Q96MA6 479 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MTMR9Q96QG7 549 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PRKAG2Q9UGJ0 569 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM237AA0A1B0GTK4 181 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MAFGO15525 162 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TDP2O95551 362 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CMA1P23946 247 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 DNAJB2P25686 324 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 LHX8Q68G74 356 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 DTHD1Q6ZMT9 781 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MRPS27Q92552 414 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 LENG9Q96B70 501 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM20AQ96MK3 541 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 TAAR1Q96RJ0 339 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PORCNQ9H237 461 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ZNF576Q9H609 170 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 IGLV3-22A0A075B6J6 115 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM86B1E9PN63 330 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MEIS1O00470 390 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SLC26A4O43511 780 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SLC37A4O43826 429 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM86B2P0C5J1 330 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 EDNRBP24530 442 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MARCKSP29966 332 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GRB14Q14449 540 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 VSIG10LQ86VR7 867 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 MXRA8Q9BRK3 442 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SLC5A4Q9NY91 659 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 CXXC1Q9P0U4 656 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 DIS3Q9Y2L1 958 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 UBIAD1Q9Y5Z9 338 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 C5orf42Q9H799 3197 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
CACNA1C-IT3-201ENST00000542680 SLC15A5A6NIM6 579 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms